RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 BTBD2Q9BX70 525 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 PCDHB16Q9NRJ7 776 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 EDARQ9UNE0 448 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 MRPS2Q9Y399 296 aaKnown RBP11.76□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF879B4DU55 563 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 F5H0A9 414 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-201ENST00000309428 CELA2BP08218 269 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-201ENST00000309428 MYF5P13349 255 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 IL32P24001 234 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 TLX1P31314 330 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-201ENST00000309428 FAUP35544 74 aaKnown RBP11.75□□□□□ -0.53
RETREG3-201ENST00000309428 MAGEB1P43366 347 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 MAP2K6P52564 334 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 PER3P56645 1201 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 TDGQ13569 410 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 PRAMEF17Q5VTA0 474 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF776Q68DI1 518 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-201ENST00000309428 FAM122CQ6P4D5 195 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 TMEM88Q6PEY1 159 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 LRRC28Q86X40 367 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-201ENST00000309428 CHCHD4Q8N4Q1 142 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 TMEM99Q8N816 258 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 OR52E4Q8NGH9 312 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 FAM174AQ8TBP5 190 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 LMF1Q96S06 567 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 ORAI3Q9BRQ5 295 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 APOOQ9BUR5 198 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 POLDIP3Q9BY77 421 aaKnown RBP11.75□□□□□ -0.53
RETREG3-201ENST00000309428 TMEM74BQ9NUR3 256 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 FTSJ1Q9UET6 329 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 PPIL1Q9Y3C6 166 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 TCRBV16S1A1N1A0A5B0 115 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 PRAMEF27A3QJZ7 478 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 OR14I1A6ND48 311 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 RDH16O75452 317 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 LALBAP00709 142 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 CLUP10909 449 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 AHCYP23526 432 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 DOC2BQ14184 412 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 NKPD1Q17RQ9 610 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 FAM74A1Q5RGS3 127 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 AGBL4Q5VU57 503 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 YOD1Q5VVQ6 348 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-201ENST00000309428 OOSP2Q86WS3 158 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 ARMC10Q8N2F6 343 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 LSMEM1Q8N8F7 131 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF454Q8N9F8 522 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 OR2L3Q8NG85 312 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 LGALS14Q8TCE9 139 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 THEM6Q8WUY1 208 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 SLC41A3Q96GZ6 507 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 OR52D1Q9H346 318 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 ERVMER34-1Q9H9K5 563 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 TRPV4Q9HBA0 871 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 HINT3Q9NQE9 182 aaKnown RBP11.75□□□□□ -0.53
RETREG3-201ENST00000309428 SEMA4GQ9NTN9 838 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 A0A1B0GV50 99 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 DOK2O60496 412 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 FARS2O95363 451 aaKnown RBP11.75□□□□□ -0.53
RETREG3-201ENST00000309428 PAPLNO95428 1278 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 CLDN20P56880 219 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 HTR4Q13639 388 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 RPE65Q16518 533 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 IDO2Q6ZQW0 420 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 NRSN1Q8IZ57 195 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 PRR22Q8IZ63 422 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 HCAR2Q8TDS4 363 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 SEC22AQ96IW7 307 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 SPACA7Q96KW9 195 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 MNTQ99583 582 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 NOX3Q9HBY0 568 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 C14orf105Q9NVL8 296 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 SDHAF2Q9NX18 166 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 SPACA6W5XKT8 324 aa11.75□□□□□ -0.53
RETREG3-201ENST00000309428 TCRBV21S2A2A0A5A6 115 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 CHP2O43745 196 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 TRAPPC2P0DI81 140 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 TRAPPC2BP0DI82 140 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 ATP5A1P25705 553 aaKnown RBP11.74□□□□□ -0.53
RETREG3-201ENST00000309428 ITPKBP27987 946 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 GRM7Q14831 915 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 PON3Q15166 354 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 FXNQ16595 210 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.74□□□□□ -0.53
RETREG3-201ENST00000309428 LCTLQ6UWM7 567 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 THAP3Q8WTV1 239 aaPredicted RBP11.74□□□□□ -0.53
RETREG3-201ENST00000309428 C3orf49Q96BT1 292 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 PEX11GQ96HA9 241 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 OR14A2Q96R54 314 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 MFFQ9GZY8 342 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 CCDC86Q9H6F5 360 aaKnown RBP11.74□□□□□ -0.53
RETREG3-201ENST00000309428 ZMAT3Q9HA38 289 aaKnown RBP11.74□□□□□ -0.53
RETREG3-201ENST00000309428 SLC6A20Q9NP91 592 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 ICKQ9UPZ9 632 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 MED31Q9Y3C7 131 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 NUBP2Q9Y5Y2 271 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 A0A0B4J293 547 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 TRABD2BA6NFA1 517 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 RNF13O43567 381 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 TRIM3O75382 744 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms