RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 RABEP2Q9H5N1 569 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 ARMC7Q9H6L4 198 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 ZNF232Q9UNY5 417 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 DEFB108AA8MXU0 73 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 DNPH1O43598 174 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 PMS2P2O95744 297 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 FESP07332 822 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 THBS1P07996 1170 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 PSMB1P20618 241 aaKnown RBP23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 SLC1A3P43003 542 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 MAP2K6P52564 334 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 EPS8Q12929 822 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 LRIF1Q5T3J3 769 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 RNF220Q5VTB9 566 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 VRK2Q86Y07 508 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 MBD6Q96DN6 1003 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 PIK3IP1Q96FE7 263 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 HDHD5Q9BXW7 423 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 CXXC4Q9H2H0 198 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 A4GALTQ9NPC4 353 aa23.52■■□□□ 1.36
CDKN2A-201ENST00000304494 TMED7-TICAM2A0A0A6YYA0 188 aa23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 HOXB9P17482 250 aaPredicted RBP23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 PPIBP23284 216 aaKnown RBP23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 PRAMEF8Q5VWM4 474 aa23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 PRAMEF7Q5VXH5 474 aa23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 MTDHQ86UE4 582 aaKnown RBP23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 DDIT4LQ96D03 193 aa23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 ACTR6Q9GZN1 396 aa23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 RLIMQ9NVW2 624 aa23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 ING1Q9UK53 422 aaPredicted RBP23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 ZNF443Q9Y2A4 671 aaPredicted RBP23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 IFT52Q9Y366 437 aa23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 TMED7Q9Y3B3 224 aa23.51■■□□□ 1.35
CDKN2A-201ENST00000304494 ZNF724A8MTY0 619 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 ZNF208O43345 1280 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 SASH3O75995 380 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 ATE1O95260 518 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 BMP2P12643 396 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 AGKQ53H12 422 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 RPS26P11Q5JNZ5 115 aaPredicted RBP23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 ZNF836Q6ZNA1 936 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 GABRG1Q8N1C3 465 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 STEAP2Q8NFT2 490 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 ARL5BQ96KC2 179 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 ALPK1Q96QP1 1244 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 SIKE1Q9BRV8 207 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 SLC25A37Q9NYZ2 338 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 EMC3Q9P0I2 261 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 OSGIN1Q9UJX0 560 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 TRIM33Q9UPN9 1127 aa23.5■■□□□ 1.35
CDKN2A-201ENST00000304494 SIAH2O43255 324 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 CCNA2P20248 432 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 TACR3P29371 465 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 COPZ1P61923 177 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 PDK3Q15120 406 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 ABLIM2Q6H8Q1 611 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 C22orf34Q6ZV56 151 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 CXorf67Q86X51 503 aaPredicted RBP23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 BBS10Q8TAM1 723 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 OR11A1Q9GZK7 315 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 BCL2L10Q9HD36 194 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 SLC52A3Q9NQ40 469 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 TMEM181Q9P2C4 612 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 CORO2BQ9UQ03 480 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 TRAPPC4Q9Y296 219 aa23.49■■□□□ 1.35
CDKN2A-201ENST00000304494 A0A1W2PPR1 153 aa23.48■■□□□ 1.35
CDKN2A-201ENST00000304494 C5orf58C9J3I9 102 aa23.48■■□□□ 1.35
CDKN2A-201ENST00000304494 EDF1O60869 148 aaKnown RBP23.48■■□□□ 1.35
CDKN2A-201ENST00000304494 GCM2O75603 506 aaPredicted RBP23.48■■□□□ 1.35
CDKN2A-201ENST00000304494 NCF2P19878 526 aaPredicted RBP23.48■■□□□ 1.35
CDKN2A-201ENST00000304494 P2RY6Q15077 328 aa23.48■■□□□ 1.35
CDKN2A-201ENST00000304494 PAGE3Q5JUK9 113 aa23.48■■□□□ 1.35
CDKN2A-201ENST00000304494 PIGXQ8TBF5 258 aa23.48■■□□□ 1.35
CDKN2A-201ENST00000304494 ZNF300Q96RE9 604 aaPredicted RBP23.48■■□□□ 1.35
CDKN2A-201ENST00000304494 USB1Q9BQ65 265 aaKnown RBP23.48■■□□□ 1.35
CDKN2A-201ENST00000304494 SPATA9Q9BWV2 254 aa23.48■■□□□ 1.35
CDKN2A-201ENST00000304494 GMEB1Q9Y692 573 aa23.48■■□□□ 1.35
CDKN2A-201ENST00000304494 A0A1W2PP18 115 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 THBDP07204 575 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 NUDT7P0C024 238 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 GKN3PP0CG01 181 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 KLK2P20151 261 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 OR3A2P47893 321 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 DEFB113Q30KQ7 82 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 BEX5Q5H9J7 111 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 ZNF311Q5JNZ3 666 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 SFRP5Q5T4F7 317 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 GALNT5Q7Z7M9 940 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 MSRB3Q8IXL7 192 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 MAL2Q969L2 176 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 THOC1Q96FV9 657 aaKnown RBP23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 ADAM19Q9H013 955 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 NPHS2Q9NP85 383 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 SLAMF8Q9P0V8 285 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 DCTN4Q9UJW0 460 aa23.47■■□□□ 1.35
CDKN2A-201ENST00000304494 IGKV3D-15A0A087WSY6 115 aa23.46■■□□□ 1.35
CDKN2A-201ENST00000304494 TMEM72A0PK05 275 aa23.46■■□□□ 1.35
CDKN2A-201ENST00000304494 EIF1BO60739 113 aaKnown RBP23.46■■□□□ 1.35
CDKN2A-201ENST00000304494 IL32P24001 234 aa23.46■■□□□ 1.35
CDKN2A-201ENST00000304494 ACAA2P42765 397 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms