RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 ARRDC1Q8N5I2 433 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 PTX4Q96A99 478 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 RAB3CQ96E17 227 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 RBMXL1Q96E39 390 aaKnown RBP4.93□□□□□ -1.62
SCN1A-201ENST00000303395 NEURL3Q96EH8 262 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 C3orf30Q96M34 536 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 NRIP3Q9NQ35 241 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 SIRT7Q9NRC8 400 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 EMCNQ9ULC0 261 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 SLC6A14Q9UN76 642 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 LAMP3Q9UQV4 416 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 CORINQ9Y5Q5 1042 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 WNK1Q9H4A3 2382 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 EDDM13A0A1B0GTR0 161 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 A0A1W2PPH5 198 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 POM121CA8CG34 1229 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 CXorf49A8MYA2 514 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-201ENST00000303395 YY2O15391 372 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 MT-CO1P00395 513 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 TMEM11P17152 192 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 SLC1A3P43003 542 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 MC2RQ01718 297 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 CTF1Q16619 201 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 TMEM71Q6P5X7 295 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 OVCH2Q7RTZ1 564 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 GPX8Q8TED1 209 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 ZFP90Q8TF47 636 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 CMBLQ96DG6 245 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 ABCB8Q9NUT2 735 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF701Q9NV72 531 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-201ENST00000303395 TVP23BQ9NYZ1 205 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 ADAMTS5Q9UNA0 930 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 BAZ2AQ9UIF9 1905 aaKnown RBP4.93□□□□□ -1.62
SCN1A-201ENST00000303395 DRGXA6NNA5 263 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 DVL1O14640 695 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 GCGP01275 180 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 SPP1P10451 314 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 DEFA4P12838 97 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 RPA2P15927 270 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 AZGP1P25311 298 aaKnown RBP4.93□□□□□ -1.62
SCN1A-201ENST00000303395 IMPA1P29218 277 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 TNFSF8P32971 234 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 MMP15P51511 669 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 DVL1P1P54792 670 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-201ENST00000303395 MTCP1P56278 107 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 MPEG1Q2M385 716 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 SOWAHAQ2M3V2 549 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 LRIT3Q3SXY7 679 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 KRBOX4Q5JUW0 171 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 ZFP82Q8N141 532 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 CPXM2Q8N436 756 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 IL22RA1Q8N6P7 574 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 NLGN2Q8NFZ4 835 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 OR4K5Q8NGD3 323 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 OR56B1Q8NGI3 324 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 OR9A2Q8NGT5 310 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 OR14C36Q8NHC7 312 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 XAGE5Q8WWM1 108 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 NTNG2Q96CW9 530 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 CELF6Q96J87 481 aaKnown RBP4.93□□□□□ -1.62
SCN1A-201ENST00000303395 ARPC5LQ9BPX5 153 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 FBXL3Q9UKT7 428 aa4.93□□□□□ -1.62
SCN1A-201ENST00000303395 UBE2J1Q9Y385 318 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-201ENST00000303395 ADORA3P0DMS8 318 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 CT45A6P0DMU7 189 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 CT45A5P0DMU8 189 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 CT45A7P0DMV0 189 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 CT45A8P0DMV1 189 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 CT45A9P0DMV2 189 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 OR12D1P0DN82 309 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 HMGA2P52926 109 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 PDGFRLQ15198 375 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 Q499Y3 187 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 CT45A2Q5DJT8 189 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF628Q5EBL2 1059 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 CT45A1Q5HYN5 189 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 CLEC6AQ6EIG7 209 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 ABHD12BQ7Z5M8 362 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-201ENST00000303395 ARHGEF39Q8N4T4 335 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 CT45A3Q8NHU0 189 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 BRI3BPQ8WY22 251 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 FUBP1Q96AE4 644 aaKnown RBP4.92□□□□□ -1.62
SCN1A-201ENST00000303395 ADAD1Q96M93 576 aaKnown RBP4.92□□□□□ -1.62
SCN1A-201ENST00000303395 SFXN2Q96NB2 322 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 UBL7Q96S82 380 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-201ENST00000303395 FEVQ99581 238 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 WRAP53Q9BUR4 548 aaKnown RBP4.92□□□□□ -1.62
SCN1A-201ENST00000303395 SRMSQ9H3Y6 488 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 SPACA1Q9HBV2 294 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 TRIP12Q14669 1992 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-201ENST00000303395 A0A1W2PS29 197 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 CBY3A6NI87 242 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 UPK3BL1B0FP48 263 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 UPK3BL2E5RIL1 263 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 M0QZQ0 153 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 TCAPO15273 167 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 SIAH2O43255 324 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 INHAP05111 366 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 SMIM10L2AP0DMW4 78 aa4.92□□□□□ -1.62
SCN1A-201ENST00000303395 SMIM10L2BP0DMW5 78 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms