RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SZT2Q5T011 3432 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 LRRK1Q38SD2 2015 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 SLC22A31A6NKX4 558 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 K7ESM1 405 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF749O43361 778 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 NDUFB6O95139 128 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 IL5P05113 134 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 C8orf89P0DMQ9 161 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 TIMP2P16035 220 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 TEAD1P28347 426 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 GDI2P50395 445 aaKnown RBP10.06□□□□□ -0.8
ZNF558-201ENST00000301475 ERVK-25P63136 954 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 MC2RQ01718 297 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 IL10RAQ13651 578 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 OR5T2Q8NGG2 359 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 PFN4Q8NHR9 129 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 STK35Q8TDR2 534 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 SMPDL3BQ92485 455 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 CNRIP1Q96F85 164 aaPredicted RBP10.06□□□□□ -0.8
ZNF558-201ENST00000301475 BBS4Q96RK4 519 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 ZDHHC5Q9C0B5 715 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 OR2AG1Q9H205 316 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 ELAC1Q9H777 363 aaKnown RBP10.06□□□□□ -0.8
ZNF558-201ENST00000301475 COA4Q9NYJ1 87 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 NFKBIL1Q9UBC1 381 aaPredicted RBP10.06□□□□□ -0.8
ZNF558-201ENST00000301475 TMEM272A0A1B0GTI8 110 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 UNC119BA6NIH7 251 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 NRG2O14511 850 aaPredicted RBP10.05□□□□□ -0.8
ZNF558-201ENST00000301475 FMO6PO60774 539 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 ITGA10O75578 1167 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 AQP8O94778 261 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 ACADLP28330 430 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 MECP2P51608 486 aaKnown RBP10.05□□□□□ -0.8
ZNF558-201ENST00000301475 DLX5P56178 289 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 AP3S2P59780 193 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 C17orf64Q86WR6 236 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF547Q8IVP9 402 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 CCDC116Q8IYX3 515 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 LNX2Q8N448 690 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 ARL14Q8N4G2 192 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 PXT1Q8NFP0 134 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 BPIFCQ8NFQ6 507 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 VN1R2Q8NFZ6 395 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 NR4A3Q92570 626 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 SMIM19Q96E16 107 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 PDCD1LG2Q9BQ51 273 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 TRMT61BQ9BVS5 477 aaKnown RBP10.05□□□□□ -0.8
ZNF558-201ENST00000301475 PBX4Q9BYU1 374 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 GPN1Q9HCN4 374 aaPredicted RBP10.05□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF304Q9HCX3 659 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 SIDT1Q9NXL6 827 aaKnown RBP10.05□□□□□ -0.8
ZNF558-201ENST00000301475 A0A0A6YYD5 115 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 CENPVL1A0A0U1RR11 272 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 H7BY64 318 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 MAN2B1O00754 1011 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 PRAMEF2O60811 474 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 FKTNO75072 461 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 OR5F1O95221 314 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 H2AFB1P0C5Y9 115 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 HOXB1P14653 301 aaPredicted RBP10.05□□□□□ -0.8
ZNF558-201ENST00000301475 SLC2A5P22732 501 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 DPP4P27487 766 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 P2RX1P51575 399 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 PDX1P52945 283 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 FOXK2Q01167 660 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 TGM3Q08188 693 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 SERTAD2Q14140 314 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 CRMP1Q14194 572 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 CDK5R1Q15078 307 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 MPP7Q5T2T1 576 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 TMEM88Q6PEY1 159 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF613Q6PF04 617 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 FCRLAQ7L513 359 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 LINC00469Q8N7U9 141 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 OR52L1Q8NGH7 329 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 OR10K1Q8NGX5 313 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF461Q8TAF7 563 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 SETD7Q8WTS6 366 aaKnown RBP10.05□□□□□ -0.8
ZNF558-201ENST00000301475 SCLYQ96I15 445 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 PRAP1Q96NZ9 151 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 PRSS27Q9BQR3 290 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 IL21Q9HBE4 155 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 CMC2Q9NRP2 79 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 POT1Q9NUX5 634 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 AKAP7Q9P0M2 348 aaPredicted RBP10.05□□□□□ -0.8
ZNF558-201ENST00000301475 LSM7Q9UK45 103 aaKnown RBP10.05□□□□□ -0.8
ZNF558-201ENST00000301475 ASF1AQ9Y294 204 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 KCNK7Q9Y2U2 307 aa10.05□□□□□ -0.8
ZNF558-201ENST00000301475 PCYT1BQ9Y5K3 369 aaPredicted RBP10.05□□□□□ -0.8
ZNF558-201ENST00000301475 SNRNP200O75643 2136 aaKnown RBP10.04□□□□□ -0.8
ZNF558-201ENST00000301475 C4orf51C9J302 202 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 GOSR2O14653 212 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 PIN1P1O15428 100 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 ARL6IP5O75915 188 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 CTSLP07711 333 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 NTSP30990 170 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 MAGEB1P43366 347 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 PPP2CBP62714 309 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 PPP2CAP67775 309 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 ARSIQ5FYB1 569 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms