RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TEX13CA0A0J9YWL9 993 aa22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 ZNF687Q8N1G0 1237 aa22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 OR52R1Q8NGF1 315 aa22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 ZPLD1Q8TCW7 415 aa22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 SLC25A18Q9H1K4 315 aa22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 MCCC2Q9HCC0 563 aa22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 SLCO1C1Q9NYB5 712 aa22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 PTP4A3O75365 173 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 TCRBP04435 133 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 SMIM10L1P0DMW3 83 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 GAAP10253 952 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 SLC2A5P22732 501 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 SSTR2P30874 369 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 TMPRSS11FQ6ZWK6 438 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 NT5CQ8TCD5 201 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 YIPF5Q969M3 257 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 TM4SF19Q96DZ7 209 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 SMIM10Q96HG1 83 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 ACTR10Q9NZ32 417 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 GNG8Q9UK08 70 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 PILRAQ9UKJ1 303 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 TMEM5Q9Y2B1 443 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 CACNA1CQ13936 2221 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 TOXO94900 526 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 PTHLHP12272 177 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 CLDN12P56749 244 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 POU6F2P78424 691 aaPredicted RBP22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 HMGB4Q8WW32 186 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 IER3IP1Q9Y5U9 82 aa22.48■■□□□ 1.19
SPTSSA-201ENST00000298130 ANKRD61A6NGH8 418 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 TRIM3O75382 744 aaPredicted RBP22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 RPS4Y1P22090 263 aaKnown RBP22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 KIR2DL1P43626 348 aaPredicted RBP22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 PRICKLE4Q2TBC4 344 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 ALG10BQ5I7T1 473 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 DMKNQ6E0U4 476 aaPredicted RBP22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 CDRT4Q8N9R6 151 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 TOR1AIP2Q8NFQ8 470 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 ZNF431Q8TF32 576 aaPredicted RBP22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 C17orf50Q8WW18 174 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 PELI1Q96FA3 418 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 CACNG6Q9BXT2 260 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 ST6GALNAC2Q9UJ37 374 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 HEBP2Q9Y5Z4 205 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 IGKV1D-16P01601 117 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 GDI2P50395 445 aaKnown RBP22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 VSX2P58304 361 aaPredicted RBP22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 ZSWIM7Q19AV6 140 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 FAM209AQ5JX71 171 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 BICRALQ6AI39 1079 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 SFRP4Q6FHJ7 346 aaPredicted RBP22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 RNF113BQ8IZP6 322 aaKnown RBP22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 FLVCR2Q9UPI3 526 aa22.47■■□□□ 1.19
SPTSSA-201ENST00000298130 A0A1B0GVT2 93 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 MCIDASD6RGH6 385 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 SELENOFO60613 162 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 DHFRP00374 187 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 HK1P19367 917 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 OR3A3P47888 321 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 P2RX3P56373 397 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 HES5Q5TA89 166 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 PXKQ7Z7A4 578 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 DNAJA3Q96EY1 480 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 GHITMQ9H3K2 345 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 DTX4Q9Y2E6 619 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 CEP290O15078 2479 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 BRINP1O60477 761 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 RDH16O75452 317 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 WNT1P04628 370 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 FHL1Q13642 323 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 ERV3-1Q14264 604 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 PYHIN1Q6K0P9 492 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 ZNF671Q8TAW3 534 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 MYADMQ96S97 322 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 DPAGT1Q9H3H5 408 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 ZFP64Q9NPA5 681 aa22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 TP53BP1Q12888 1972 aaPredicted RBP22.46■■□□□ 1.19
SPTSSA-201ENST00000298130 ACOD1A6NK06 481 aa22.45■■□□□ 1.19
SPTSSA-201ENST00000298130 SC5DO75845 299 aa22.45■■□□□ 1.19
SPTSSA-201ENST00000298130 MGAT2Q10469 447 aa22.45■■□□□ 1.19
SPTSSA-201ENST00000298130 GPALPP1Q8IXQ4 340 aa22.45■■□□□ 1.19
SPTSSA-201ENST00000298130 OR6K6Q8NGW6 343 aa22.45■■□□□ 1.19
SPTSSA-201ENST00000298130 RERGQ96A58 199 aaPredicted RBP22.45■■□□□ 1.19
SPTSSA-201ENST00000298130 HYLS1Q96M11 299 aa22.45■■□□□ 1.19
SPTSSA-201ENST00000298130 NMNAT3Q96T66 252 aa22.45■■□□□ 1.19
SPTSSA-201ENST00000298130 OR51J1Q9H342 316 aa22.45■■□□□ 1.19
SPTSSA-201ENST00000298130 FOLH1BQ9HBA9 442 aa22.45■■□□□ 1.19
SPTSSA-201ENST00000298130 COPS3Q9UNS2 423 aa22.45■■□□□ 1.19
SPTSSA-201ENST00000298130 A0A0B4J2E0 115 aa22.45■■□□□ 1.18
SPTSSA-201ENST00000298130 A0A1B0GX12 115 aa22.45■■□□□ 1.18
SPTSSA-201ENST00000298130 A0A1W2PQ72 361 aa22.45■■□□□ 1.18
SPTSSA-201ENST00000298130 GPR75O95800 540 aa22.45■■□□□ 1.18
SPTSSA-201ENST00000298130 GALP22466 123 aa22.45■■□□□ 1.18
SPTSSA-201ENST00000298130 STOMP27105 288 aa22.45■■□□□ 1.18
SPTSSA-201ENST00000298130 RFPL4BQ6ZWI9 263 aa22.45■■□□□ 1.18
SPTSSA-201ENST00000298130 ABHD13Q7L211 337 aa22.45■■□□□ 1.18
SPTSSA-201ENST00000298130 ZNF433Q8N7K0 673 aaPredicted RBP22.45■■□□□ 1.18
SPTSSA-201ENST00000298130 OR51Q1Q8NH59 317 aa22.45■■□□□ 1.18
SPTSSA-201ENST00000298130 LGALS14Q8TCE9 139 aa22.45■■□□□ 1.18
SPTSSA-201ENST00000298130 TRPV4Q9HBA0 871 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms