RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 CCSO14618 274 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 FZD6O60353 706 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 RAP2BP61225 183 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 UBE2IP63279 158 aaKnown RBP13.79□□□□□ -0.2
SPIDR-201ENST00000297423 RPE65Q16518 533 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 NXPE4Q6UWF7 544 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 CMIPQ8IY22 773 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 BEST3Q8N1M1 668 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 TBC1D19Q8N5T2 526 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 ZSCAN1Q8NBB4 408 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 DNAAF1Q8NEP3 725 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 SYNPRQ8TBG9 265 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 PAQR8Q8TEZ7 354 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 FBXO17Q96EF6 278 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 XKR8Q9H6D3 395 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 TCF7L1Q9HCS4 588 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 FZD3Q9NPG1 666 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 C14orf105Q9NVL8 296 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 GFYI3L273 518 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 PRAMEF2O60811 474 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 LAMP2P13473 410 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 BTCP35070 178 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 AKR1C3P42330 323 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 ENTPD8Q5MY95 495 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 TMPRSS12Q86WS5 348 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 OR4N5Q8IXE1 308 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 RASGEF1AQ8N9B8 481 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 BPIFCQ8NFQ6 507 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 OR52D1Q9H346 318 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 FGF20Q9NP95 211 aaPredicted RBP13.79□□□□□ -0.2
SPIDR-201ENST00000297423 GPR55Q9Y2T6 319 aaPredicted RBP13.79□□□□□ -0.2
SPIDR-201ENST00000297423 C13orf42A0A1B0GVH6 325 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 ARL6IP5O75915 188 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 PSMD4P55036 377 aaKnown RBP13.79□□□□□ -0.2
SPIDR-201ENST00000297423 RBM39Q14498 530 aaKnown RBP13.79□□□□□ -0.2
SPIDR-201ENST00000297423 SLC36A2Q495M3 483 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 VASNQ6EMK4 673 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 KCTD9Q7L273 389 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 UBE2E3Q969T4 207 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 MARVELD3Q96A59 401 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 ZNF285Q96NJ3 590 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 ADAP2Q9NPF8 381 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 KCMF1Q9P0J7 381 aa13.79□□□□□ -0.2
SPIDR-201ENST00000297423 GVINP1Q7Z2Y8 2422 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 MFSD2BA6NFX1 497 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 SUSD5O60279 629 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 PAK4O96013 591 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-201ENST00000297423 CEBPBP17676 345 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 LIMS1P48059 325 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 KHKP50053 298 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 SLC9B2Q86UD5 537 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 C12orf45Q8N5I9 185 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-201ENST00000297423 ELP4Q96EB1 424 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 AIF1LQ9BQI0 150 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 MYNNQ9NPC7 610 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 TRBV23-1A0A0A0MS06 115 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 A0A1W2PRQ8 180 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 TMEM200CA6NKL6 621 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 ERI3O43414 337 aaKnown RBP13.78□□□□□ -0.2
SPIDR-201ENST00000297423 GMFGO60234 142 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 PPP1R3DO95685 299 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 PRPH2P23942 346 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 MAOBP27338 520 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 AQP2P41181 271 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 CDK5Q00535 292 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 TSPAN31Q12999 210 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 SHHQ15465 462 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 FAM209BQ5JX69 171 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 FAM109BQ6ICB4 259 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-201ENST00000297423 FOXRED2Q8IWF2 684 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 YAF2Q8IY57 180 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 HAVCR2Q8TDQ0 301 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 ATOH1Q92858 354 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-201ENST00000297423 HCAR1Q9BXC0 346 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 SHARPINQ9H0F6 387 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 KRCC1Q9NPI7 259 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-201ENST00000297423 ASB6Q9NWX5 421 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 AIPO00170 330 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 HLA-DQB1P01920 261 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 LINC00271P0C7V0 271 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 ART1P52961 327 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 ZNF155Q12901 538 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-201ENST00000297423 TMEM255AQ5JRV8 349 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 KCT2Q8NC54 265 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 OR9A1PQ8NGU1 263 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 SLC41A3Q96GZ6 507 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 UBQLN3Q9H347 655 aa13.78□□□□□ -0.2
SPIDR-201ENST00000297423 ADH1CP00326 375 aa13.77□□□□□ -0.2
SPIDR-201ENST00000297423 CHRM4P08173 479 aa13.77□□□□□ -0.2
SPIDR-201ENST00000297423 VAMP1P23763 118 aa13.77□□□□□ -0.2
SPIDR-201ENST00000297423 HLA-FP30511 346 aa13.77□□□□□ -0.2
SPIDR-201ENST00000297423 DLX5P56178 289 aa13.77□□□□□ -0.2
SPIDR-201ENST00000297423 C22orf39Q6P5X5 142 aa13.77□□□□□ -0.2
SPIDR-201ENST00000297423 CCDC36Q8IYA8 594 aa13.77□□□□□ -0.2
SPIDR-201ENST00000297423 OR5AR1Q8NGP9 310 aa13.77□□□□□ -0.2
SPIDR-201ENST00000297423 KCTD12Q96CX2 325 aaKnown RBP13.77□□□□□ -0.2
SPIDR-201ENST00000297423 NEURL3Q96EH8 262 aa13.77□□□□□ -0.2
SPIDR-201ENST00000297423 ZC3H10Q96K80 434 aaKnown RBP13.77□□□□□ -0.2
SPIDR-201ENST00000297423 DNTTIP1Q9H147 329 aa13.77□□□□□ -0.2
SPIDR-201ENST00000297423 SLITRK2Q9H156 845 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms