RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 TRIM2Q9C040 744 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 ZNF703Q9H7S9 590 aaPredicted RBP13.72□□□□□ -0.21
CCDC140-201ENST00000295226 NMNAT1Q9HAN9 279 aaPredicted RBP13.72□□□□□ -0.21
CCDC140-201ENST00000295226 RPS6KB2Q9UBS0 482 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 U3KQV3 271 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 DLGAP1O14490 977 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 AHCYL1O43865 530 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 EFNA2O43921 213 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 FMO6PO60774 539 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 LYPD3O95274 346 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 ITGA2P17301 1181 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 RRM2P31350 389 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 SLC1A3P43003 542 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 LSM11P83369 360 aaKnown RBP eCLIP13.72□□□□□ -0.21
CCDC140-201ENST00000295226 SPIBQ01892 262 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 LAPTM4AQ15012 233 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 FOXB2Q5VYV0 432 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 WDR88Q6ZMY6 472 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 NKAIN4Q8IVV8 208 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 LSMEM1Q8N8F7 131 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 ATP6V1C2Q8NEY4 427 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 OR14L1PQ8NHC6 308 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 C3orf49Q96BT1 292 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 PRRC1Q96M27 445 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 SLC25A18Q9H1K4 315 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 NTN4Q9HB63 628 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 MAN2C1Q9NTJ4 1040 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 ACER3Q9NUN7 267 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 USE1Q9NZ43 259 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 DNAJC13O75165 2243 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 A0A0B4J2E0 115 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 A0A1B0GX12 115 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 TRAPPC13A5PLN9 417 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 G3V2T6 193 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 GNGT2O14610 69 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 TFAP2AP05549 437 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 PAX7P23759 505 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 RFX4Q33E94 735 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 ALG10BQ5I7T1 473 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 OR2T5Q6IEZ7 315 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 ZNF605Q86T29 641 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 CYP4Z1Q86W10 505 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 ALDH16A1Q8IZ83 802 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 TEX19Q8NA77 164 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 FAM98AQ8NCA5 519 aaKnown RBP13.71□□□□□ -0.21
CCDC140-201ENST00000295226 OR2T29Q8NH02 315 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 MAGEE2Q8TD90 523 aaPredicted RBP13.71□□□□□ -0.21
CCDC140-201ENST00000295226 ADAM19Q9H013 955 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 SLC6A15Q9H2J7 730 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 EVA1AQ9H8M9 152 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 OSGIN1Q9UJX0 560 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 ACAD8Q9UKU7 415 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 SLC6A5Q9Y345 797 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 LIPGQ9Y5X9 500 aa13.71□□□□□ -0.21
CCDC140-201ENST00000295226 MPDZO75970 2070 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 A0A087WXM4 84 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 TRBV4-1A0A0J9YWV2 114 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 FAM47E-STBD1D6RA91 191 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 FAAHO00519 579 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 ZNHIT1O43257 154 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 H1F0P07305 194 aaKnown RBP13.7□□□□□ -0.22
CCDC140-201ENST00000295226 SRD5A2P31213 254 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 GK3PQ14409 553 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 RAET1LQ5VY80 246 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 TTC23Q5W5X9 447 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 ZNF613Q6PF04 617 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 TTC33Q6PID6 262 aaPredicted RBP13.7□□□□□ -0.22
CCDC140-201ENST00000295226 TBPL2Q6SJ96 375 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 USP51Q70EK9 711 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 TMEM179BQ7Z7N9 219 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 ATG4DQ86TL0 474 aaPredicted RBP13.7□□□□□ -0.22
CCDC140-201ENST00000295226 SLC22A16Q86VW1 577 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 MEX3DQ86XN8 651 aaKnown RBP13.7□□□□□ -0.22
CCDC140-201ENST00000295226 ADGRG3Q86Y34 549 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 HIPK1Q86Z02 1210 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 OR5K1Q8NHB7 308 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 PNPLA2Q96AD5 504 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 ZNF347Q96SE7 839 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 BARD1Q99728 777 aaKnown RBP13.7□□□□□ -0.22
CCDC140-201ENST00000295226 RBM4BQ9BQ04 359 aaKnown RBP13.7□□□□□ -0.22
CCDC140-201ENST00000295226 PRSS27Q9BQR3 290 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 RBM4Q9BWF3 364 aaKnown RBP13.7□□□□□ -0.22
CCDC140-201ENST00000295226 TMEM185BQ9H7F4 350 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 B4GALT7Q9UBV7 327 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 COMMD3-BMI1R4GMX3 469 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 SVILO95425 2214 aa13.7□□□□□ -0.22
CCDC140-201ENST00000295226 TMED7-TICAM2A0A0A6YYA0 188 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 OR2M5A3KFT3 312 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 TRIM64A6NGJ6 449 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 ERVH48-1M5A8F1 160 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 TFECO14948 347 aaPredicted RBP13.69□□□□□ -0.22
CCDC140-201ENST00000295226 OR5F1O95221 314 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 GADD45GO95257 159 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 ALPLP05186 524 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 PEPDP12955 493 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 ZNF24P17028 368 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 B3GALT5-AS1P59052 145 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 ADARB1P78563 741 aaKnown RBP13.69□□□□□ -0.22
CCDC140-201ENST00000295226 SLC10A1Q14973 349 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms