RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 VPS13AQ96RL7 3174 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 IQCMA0A1B0GVH7 501 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 TRDV1A0A1B0GX56 115 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 A0A1W2PQL4 384 aaPredicted RBP12.84□□□□□ -0.35
NXF1-201ENST00000294172 CDC14CA4D256 554 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 TTC36A6NLP5 189 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 GTPBP1O00178 669 aaKnown RBP12.84□□□□□ -0.35
NXF1-201ENST00000294172 SCDO00767 359 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 OIP5O43482 229 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 IFNGP01579 166 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 HLA-DPB1P04440 258 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 FBLP22087 321 aaKnown RBP12.84□□□□□ -0.35
NXF1-201ENST00000294172 AZGP1P25311 298 aaKnown RBP12.84□□□□□ -0.35
NXF1-201ENST00000294172 ZP2Q05996 745 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 BIKQ13323 160 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 NSDHLQ15738 373 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 DESI1Q6ICB0 168 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 ARHGAP11AQ6P4F7 1023 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 CD200R1LQ6Q8B3 271 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 TSSK4Q6SA08 328 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 CBLN3Q6UW01 205 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 MARCH9Q86YJ5 346 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 ZNF527Q8NB42 609 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 C3orf49Q96BT1 292 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 OR1F2PQ96R84 312 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 ADOQ96SZ5 270 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 SDHCQ99643 169 aaPredicted RBP12.84□□□□□ -0.35
NXF1-201ENST00000294172 DPYSL5Q9BPU6 564 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 JAM3Q9BX67 310 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 NRSN2Q9GZP1 204 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 SP140LQ9H930 580 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 ZNF304Q9HCX3 659 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 BABAM2Q9NXR7 383 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 BAIAP2Q9UQB8 552 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 IER3IP1Q9Y5U9 82 aa12.84□□□□□ -0.35
NXF1-201ENST00000294172 C2orf92A0A1B0GVN3 265 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 MCIDASD6RGH6 385 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 K7ESF4 209 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 GABRPO00591 440 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 NDUFB2O95178 105 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 UTS2O95399 124 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 HIST1H1CP16403 213 aaKnown RBP12.83□□□□□ -0.36
NXF1-201ENST00000294172 FGF9P31371 208 aaPredicted RBP12.83□□□□□ -0.36
NXF1-201ENST00000294172 PPICP45877 212 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 EFNA3P52797 238 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 ACSM1Q08AH1 577 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 ZMAT1Q5H9K5 638 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 ARHGAP40Q5TG30 622 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 D2HGDHQ8N465 521 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 ARIH2OSQ8N7S6 290 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 OR51L1Q8NGJ5 315 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 MVB12AQ96EY5 273 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 SLC46A1Q96NT5 459 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 NUDT22Q9BRQ3 303 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 MARCH7Q9H992 704 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 SERTAD3Q9UJW9 196 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 ADAM18Q9Y3Q7 739 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 NCR1O76036 304 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 SNX4O95219 450 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 SBK2P0C263 348 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 GIMD1P0DJR0 217 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 UBL4AP11441 157 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 MADCAM1Q13477 382 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 GALEQ14376 348 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 ARMC4Q5T2S8 1044 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 VASNQ6EMK4 673 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 APOOLQ6UXV4 268 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 C10orf53Q8N6V4 93 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 NLGN4YQ8NFZ3 816 aaPredicted RBP12.83□□□□□ -0.36
NXF1-201ENST00000294172 NEIL3Q8TAT5 605 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 SMPDL3BQ92485 455 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 CLDN23Q96B33 292 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 LCORQ96JN0 433 aaPredicted RBP12.83□□□□□ -0.36
NXF1-201ENST00000294172 TIMP4Q99727 224 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 MED18Q9BUE0 208 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 DUSP15Q9H1R2 295 aaPredicted RBP12.83□□□□□ -0.36
NXF1-201ENST00000294172 ADGRL4Q9HBW9 690 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 SIT1Q9Y3P8 196 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 SIRT4Q9Y6E7 314 aaPredicted RBP12.83□□□□□ -0.36
NXF1-201ENST00000294172 V9GYH0 126 aa12.83□□□□□ -0.36
NXF1-201ENST00000294172 IGKV3D-11A0A0A0MRZ8 115 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 ELOA3DA6NLF2 546 aaPredicted RBP12.82□□□□□ -0.36
NXF1-201ENST00000294172 SERPINI2O75830 405 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 IL33O95760 270 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 DDAH2O95865 285 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 SPNP16150 400 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 SLC2A5P22732 501 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 CDC20Q12834 499 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 CARTPTQ16568 116 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 ELOA3BQ3SY89 546 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 SHISA6Q6ZSJ9 500 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 Q7L0L9 218 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 ZNF440Q8IYI8 595 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 ELOA3Q8NG57 546 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 ZNF721Q8TF20 911 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 CDX2Q99626 313 aaPredicted RBP12.82□□□□□ -0.36
NXF1-201ENST00000294172 NUDT9Q9BW91 350 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 TTTY10Q9BZA0 68 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 HOXD1Q9GZZ0 328 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 CPNE5Q9HCH3 593 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms