RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TSPAN5P62079 268 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 KCNC4Q03721 635 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 FIGNL1Q6PIW4 674 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF836Q6ZNA1 936 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 APLFQ8IW19 511 aaPredicted RBP7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 OR52P1PQ8NH57 321 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 TMBIM1Q969X1 311 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 SH2D2AQ9NP31 389 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 CLN6Q9NWW5 311 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 DNAJC27Q9NZQ0 273 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 IL17BQ9UHF5 180 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 POLHQ9Y253 713 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 NPFFR2Q9Y5X5 522 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 H3BNX3 289 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 CEACAM4O75871 244 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 DNAJB5O75953 348 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 LGI1O95970 557 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 FABP3P05413 133 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 DBTP11182 482 aaKnown RBP7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 ITGAMP11215 1152 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 NID1P14543 1247 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 SSR4P51571 173 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 UCNP55089 124 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 UBE2NP61088 152 aaKnown RBP7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF791Q3KP31 576 aaPredicted RBP7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 KLHL26Q53HC5 615 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF311Q5JNZ3 666 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 SLC35F1Q5T1Q4 408 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 SLCO4A1Q96BD0 722 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 CPNE5Q9HCH3 593 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 C8orf4Q9NR00 106 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 IGLV3-32A0A0A0MS00 114 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 ANKRD33BA6NCL7 494 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 CENPXA8MT69 81 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 NPIPA5E9PKD4 350 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 WRBO00258 174 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 UTS2O95399 124 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 IFNA6P05013 189 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 S100GP29377 79 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 DLX5P56178 289 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 RBPJQ06330 500 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 ATP6AP1Q15904 470 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 AKIRIN2Q53H80 203 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 SGCDQ92629 289 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 SPACA9Q96E40 222 aaPredicted RBP7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 ZC3HAV1LQ96H79 300 aaKnown RBP7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 IL1RAPQ9NPH3 570 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 TBC1D23Q9NUY8 699 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 CKLFQ9UBR5 152 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 TESQ9UGI8 421 aaKnown RBP7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 NPIPA1Q9UND3 350 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 AP4S1Q9Y587 144 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 ALG1L2C9J202 215 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 NPIPA2E9PIF3 369 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 NPIPA3F8WFD2 350 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 M0QX08 132 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 AKAP8O43823 692 aaKnown RBP7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 FADS1O60427 444 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 ECDO95905 644 aaPredicted RBP7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 THRBP10828 461 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 SUMO3P55854 103 aaPredicted RBP7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 FOXL2P58012 376 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 GPR141Q7Z602 305 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 SETD9Q8NE22 299 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 OR9K2Q8NGE7 335 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 PSD2Q9BQI7 771 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 ANKRD19PQ9H560 264 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 TPRKBQ9Y3C4 175 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 EIF4E2O60573 245 aaKnown RBP7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 FESP07332 822 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 MERTKQ12866 999 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 ENPP6Q6UWR7 440 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 IL20RBQ6UXL0 311 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 ERMP1Q7Z2K6 904 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 WDR53Q7Z5U6 358 aaPredicted RBP7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 RBP7Q96R05 134 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 RASL10BQ96S79 203 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 AGPAT4Q9NRZ5 378 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 DAPK2Q9UIK4 370 aa7.72□□□□□ -1.17
PTPDC1-201ENST00000288976 PCNX2A6NKB5 2137 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 NOS1APO75052 506 aaPredicted RBP7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 ENTPD5O75356 428 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 SCGNO76038 276 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 PRKD3O94806 890 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 PRSS23O95084 383 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 ATP6V1G2O95670 118 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 HSD11B1P28845 292 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 EVI2BP34910 448 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 RASGEF1BQ0VAM2 473 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 ARFRP1Q13795 201 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 KRT74Q7RTS7 529 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 ALDH16A1Q8IZ83 802 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 OR4N2Q8NGD1 307 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 TVP23BQ9NYZ1 205 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 CNIH4Q9P003 139 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 PCDHB10Q9UN67 800 aa7.71□□□□□ -1.17
PTPDC1-201ENST00000288976 CDHR4A6H8M9 788 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 SERINC4A6NH21 518 aa7.71□□□□□ -1.18
PTPDC1-201ENST00000288976 CSTAP01040 98 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms