RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TNFSF11O14788 317 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 CXCL13O43927 109 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 BCHEP06276 602 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 PABPC4LP0CB38 370 aaKnown RBP8.18□□□□□ -1.1
HMGN1-201ENST00000288344 TMIGD3P0DMS9 266 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-201ENST00000288344 TROVE2P10155 538 aaKnown RBP eCLIP8.18□□□□□ -1.1
HMGN1-201ENST00000288344 CD8BP10966 210 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 PGCP20142 388 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 PPIBP23284 216 aaKnown RBP8.18□□□□□ -1.1
HMGN1-201ENST00000288344 SLC6A2P23975 617 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 GCKP35557 465 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 APOBEC1P41238 236 aaKnown RBP8.18□□□□□ -1.1
HMGN1-201ENST00000288344 SLC1A3P43003 542 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF41P51814 821 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-201ENST00000288344 RAC3P60763 192 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 CDK6Q00534 326 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 SF3A3Q12874 501 aaKnown RBP eCLIP8.18□□□□□ -1.16e-7■□□□□ 11.3
HMGN1-201ENST00000288344 ZSWIM7Q19AV6 140 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 TMEM176BQ3YBM2 270 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-201ENST00000288344 GLIPR1L2Q4G1C9 344 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 EEF1A1P5Q5VTE0 462 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 REEP3Q6NUK4 255 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 VWA1Q6PCB0 445 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 DHRS4L2Q6PKH6 230 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 C22orf34Q6ZV56 151 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 CCDC80Q76M96 950 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 GRINAQ7Z429 371 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 DHDDSQ86SQ9 333 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 SERPINA11Q86U17 422 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 ZZZ3Q8IYH5 903 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 UBQLNLQ8IYU4 475 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 LSMEM1Q8N8F7 131 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 GPR32P1Q8NGA4 272 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 RNF128Q8TEB7 428 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 RNASE6Q93091 150 aaKnown RBP8.18□□□□□ -1.1
HMGN1-201ENST00000288344 INTS12Q96CB8 462 aaKnown RBP8.18□□□□□ -1.1
HMGN1-201ENST00000288344 LRRC58Q96CX6 371 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 ARL5BQ96KC2 179 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 KLHL15Q96M94 604 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 SFXN3Q9BWM7 321 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 PINK1Q9BXM7 581 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 RAD21L1Q9H4I0 556 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 LIN7BQ9HAP6 207 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 CTPS2Q9NRF8 586 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 MRGBPQ9NV56 204 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 PAQR5Q9NXK6 330 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-201ENST00000288344 OSGIN1Q9UJX0 560 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF443Q9Y2A4 671 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-201ENST00000288344 MYO9AB2RTY4 2548 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 LOC100653049A0A140TA62 436 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 GMNCA6NCL1 334 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 FAM90A27PA6NNH2 459 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF814B7Z6K7 855 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 DVL2O14641 736 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 MSTNO14793 375 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 SEC14L5O43304 696 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF208O43345 1280 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 SS18L1O75177 396 aaPredicted RBP8.17□□□□□ -1.1
HMGN1-201ENST00000288344 KRT34O76011 436 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 LYPD3O95274 346 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 GKN3PP0CG01 181 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 IMPDH2P12268 514 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 IL7RP16871 459 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 BMP5P22003 454 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 ENPP1P22413 925 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 GSTT1P30711 240 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 PRKAR1BP31321 381 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 IDH2P48735 452 aaKnown RBP8.17□□□□□ -1.1
HMGN1-201ENST00000288344 CLK1P49759 484 aaKnown RBP8.17□□□□□ -1.1
HMGN1-201ENST00000288344 P2RY4P51582 365 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 MAP2K6P52564 334 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 CARD18P57730 90 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 MTPNP58546 118 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 KRTAP10-9P60411 292 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 EGR4Q05215 589 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 DMTNQ08495 405 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 RBBP4Q09028 425 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 SELENBP1Q13228 472 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 CAPRIN1Q14444 709 aaKnown RBP8.17□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF239Q16600 458 aaKnown RBP8.17□□□□□ -1.1
HMGN1-201ENST00000288344 DUSP7Q16829 419 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 TRMT5Q32P41 509 aaKnown RBP8.17□□□□□ -1.1
HMGN1-201ENST00000288344 GCNT6Q5T4J0 391 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 C6orf89Q6UWU4 347 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 NHLRC1Q6VVB1 395 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 LINC00114Q6XXX2 140 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 TMPPEQ6ZT21 453 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 FAM214BQ7L5A3 538 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 SYT9Q86SS6 491 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 TSPYL5Q86VY4 417 aaPredicted RBP8.17□□□□□ -1.1
HMGN1-201ENST00000288344 PEX5LQ8IYB4 626 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 GCNT2Q8N0V5 402 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF614Q8N883 585 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 OR8J3Q8NGG0 315 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 NFKBIDQ8NI38 313 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 BBS10Q8TAM1 723 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 WDR60Q8WVS4 1066 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 TMEM234Q8WY98 164 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 MDFIQ99750 246 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 SLC39A3Q9BRY0 314 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms