RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 F8A1P23610 371 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 NCF4Q15080 339 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 HES3Q5TGS1 186 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 PRAMEF20Q5VT98 475 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 SLC27A4Q6P1M0 643 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 ZNF620Q6ZNG0 422 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 DEPDC4Q8N2C3 294 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 STX19Q8N4C7 294 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 OR10G3Q8NGC4 313 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 OR5M1Q8NGP8 315 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 FANK1Q8TC84 345 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 HCAR1Q9BXC0 346 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 ZNF160Q9HCG1 818 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 FBXO8Q9NRD0 319 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 C14orf105Q9NVL8 296 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 MED13Q9UHV7 2174 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 VDAC3Q9Y277 283 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 CFL2Q9Y281 166 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 NOSIPQ9Y314 301 aaKnown RBP10.03□□□□□ -0.8
GGPS1-201ENST00000282841 HS3ST3B1Q9Y662 390 aa10.03□□□□□ -0.8
GGPS1-201ENST00000282841 CLCA1A8K7I4 914 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 LRRTM2O43300 516 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 KLF4O43474 513 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 PTHP01270 115 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 HBQ1P09105 142 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 ZNF883P0CG24 379 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 EVI2BP34910 448 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 CDK5Q00535 292 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 FNDC7Q5VTL7 733 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 C12orf73Q69YU5 71 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 OAFQ86UD1 273 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 ZNF441Q8N8Z8 693 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 OR51L1Q8NGJ5 315 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 ISOC1Q96CN7 298 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 IFT27Q9BW83 186 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 YTHDF1Q9BYJ9 559 aaKnown RBP10.02□□□□□ -0.8
GGPS1-201ENST00000282841 UBQLN3Q9H347 655 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 CLN6Q9NWW5 311 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 MED11Q9P086 117 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 ADAM18Q9Y3Q7 739 aa10.02□□□□□ -0.8
GGPS1-201ENST00000282841 C9J4A7 227 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 CHP2O43745 196 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 ICMTO60725 284 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 ATE1O95260 518 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 PPP1R3DO95685 299 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 CRYZL1O95825 349 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 TBXA2RP21731 343 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 FPR3P25089 353 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 TACR3P29371 465 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 IFNGR2P38484 337 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 MRPL28Q13084 256 aaKnown RBP10.02□□□□□ -0.81
GGPS1-201ENST00000282841 TRA2AQ13595 282 aaKnown RBP eCLIP10.02□□□□□ -0.81
GGPS1-201ENST00000282841 ZBED5Q49AG3 693 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 SOWAHCQ53LP3 525 aaPredicted RBP10.02□□□□□ -0.81
GGPS1-201ENST00000282841 SYT14P1Q58G82 188 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 ULK3Q6PHR2 472 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 SLC34A3Q8N130 599 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 ZNF527Q8NB42 609 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 PRSS33Q8NF86 280 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 RPL3LQ92901 407 aaKnown RBP10.02□□□□□ -0.81
GGPS1-201ENST00000282841 C12orf43Q96C57 262 aaKnown RBP10.02□□□□□ -0.81
GGPS1-201ENST00000282841 MED30Q96HR3 178 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 ART5Q96L15 291 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 MOGAT1Q96PD6 335 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 OR5M11Q96RB7 305 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 TRIM2Q9C040 744 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 RERGLQ9H628 205 aa10.02□□□□□ -0.81
GGPS1-201ENST00000282841 ATMQ13315 3056 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 SMIM31A0A1B0GVY4 71 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 EFCAB9A8MZ26 197 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 BLOC1S5-TXNDC5H3BN57 136 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 SOCS6O14544 535 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 MT-CO3P00414 261 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 SMSP52788 366 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 SLC16A1P53985 500 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 BIKQ13323 160 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 PCOLCEQ15113 449 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 TRIP6Q15654 476 aaKnown RBP10.01□□□□□ -0.81
GGPS1-201ENST00000282841 OTPQ5XKR4 325 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 GTF2IRD2BQ6EKJ0 949 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 TUBA3EQ6PEY2 450 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 ZNF613Q6PF04 617 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 IL20RBQ6UXL0 311 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 RASSF6Q6ZTQ3 369 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 ZNF550Q7Z398 422 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 GTF2IRD2Q86UP8 949 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 KTI12Q96EK9 354 aaPredicted RBP10.01□□□□□ -0.81
GGPS1-201ENST00000282841 DEFB126Q9BYW3 111 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 OR11A1Q9GZK7 315 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 ACOT13Q9NPJ3 140 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 KLHL1Q9NR64 748 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 PTTG2Q9NZH5 202 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 RSL24D1Q9UHA3 163 aaKnown RBP10.01□□□□□ -0.81
GGPS1-201ENST00000282841 PADI1Q9ULC6 663 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 HSPE1-MOB4S4R3N1 261 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 SPTBN4Q9H254 2564 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 IGKV1D-42A0A075B6H8 117 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 ELOA3DA6NLF2 546 aaPredicted RBP10.01□□□□□ -0.81
GGPS1-201ENST00000282841 IFI6P09912 130 aa10.01□□□□□ -0.81
GGPS1-201ENST00000282841 BTF3P20290 206 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms