RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 KLHL26Q53HC5 615 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 QSOX2Q6ZRP7 698 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 S100ZQ8WXG8 99 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 ZMYND19Q96E35 227 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-201ENST00000279247 SLC46A1Q96NT5 459 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 DCLRE1CQ96SD1 692 aaKnown RBP16.44■□□□□ 0.22
CAPN1-201ENST00000279247 SEC14L4Q9UDX3 406 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 KNTC1P50748 2209 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 KIF26BQ2KJY2 2108 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 DAB2P98082 770 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 PWWP2BQ6NUJ5 590 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 TMEM71Q6P5X7 295 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 RTL4Q6ZR62 310 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 UFD1Q92890 307 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 SGTBQ96EQ0 304 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 CEP19Q96LK0 163 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 ZNF578Q96N58 590 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 MMP27Q9H306 513 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 ERVMER34-1Q9H9K5 563 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 FGF20Q9NP95 211 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 TXNL4BQ9NX01 149 aaKnown RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 ERVK13-1Q9NX77 482 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 EXOSC1Q9Y3B2 195 aaKnown RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 IGKV3D-11A0A0A0MRZ8 115 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 TCRBV16S1A1N1A0A5B0 115 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 DVL2O14641 736 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 HIST1H1CP16403 213 aaKnown RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 NAA10P41227 235 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 PSMD4P55036 377 aaKnown RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 ERVK-25P63136 954 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 NR0B2Q15466 257 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 TOMM34Q15785 309 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 TRIM16LQ309B1 348 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 WDR74Q6RFH5 385 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 LSMEM1Q8N8F7 131 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 ZNF527Q8NB42 609 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 DAZLQ92904 295 aaKnown RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 MVB12AQ96EY5 273 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 PILRBQ9UKJ0 227 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 SDK2Q58EX2 2172 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 DAPL1A0PJW8 107 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 CD8B2A6NJW9 211 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 SCRG1O75711 98 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 WISP1O95388 367 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 IGKV3-11P04433 115 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 CD8BP10966 210 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 TCEA1P23193 301 aaKnown RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 SDC2P34741 201 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 EBPQ15125 230 aaKnown RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 PLK5Q496M5 336 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 MEPCEQ7L2J0 689 aaKnown RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 KLHL36Q8N4N3 616 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 OR7G1Q8NGA0 311 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 SAP25Q8TEE9 199 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 C8orf44Q96CB5 159 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 RASD2Q96D21 266 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 BARHL1Q9BZE3 327 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 ZNF768Q9H5H4 540 aaKnown RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 AKIRIN1Q9H9L7 192 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-201ENST00000279247 FBXO8Q9NRD0 319 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 CMC2Q9NRP2 79 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 CFL2Q9Y281 166 aa16.43■□□□□ 0.22
CAPN1-201ENST00000279247 A0A1B0GTQ1 180 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 ZNF264O43296 627 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 ZNF3P17036 446 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.42■□□□□ 0.22
CAPN1-201ENST00000279247 LYPD4Q6UWN0 246 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 DCDC5Q6ZRR9 648 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 PMM1Q92871 262 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 ADIPOR1Q96A54 375 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 TBL1XR1Q9BZK7 514 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 CCDC86Q9H6F5 360 aaKnown RBP16.42■□□□□ 0.22
CAPN1-201ENST00000279247 PTP4A3O75365 173 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 F13BP05160 661 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 AZGP1P25311 298 aaKnown RBP16.42■□□□□ 0.22
CAPN1-201ENST00000279247 SLC6A6P31641 620 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 FABP5Q01469 135 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 ZNF362Q5T0B9 420 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-201ENST00000279247 C19orf48Q6RUI8 117 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 SLC29A4Q7RTT9 530 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 CLDN22Q8N7P3 220 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 FAM83FQ8NEG4 500 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-201ENST00000279247 MOGAT1Q96PD6 335 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 NMNAT3Q96T66 252 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 TEAD3Q99594 435 aa16.42■□□□□ 0.22
CAPN1-201ENST00000279247 ZNF346Q9UL40 294 aaKnown RBP16.42■□□□□ 0.22
CAPN1-201ENST00000279247 EP300Q09472 2414 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-201ENST00000279247 A0A087WUJ7 227 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 EFCAB7A8K855 629 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 IL33O95760 270 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 GRPRP30550 384 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 CTBP2P56545 445 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 HNRNPA0Q13151 305 aaKnown RBP16.41■□□□□ 0.22
CAPN1-201ENST00000279247 RPTNQ6XPR3 784 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 RFLNBQ8N5W9 214 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 ACBD7Q8N6N7 88 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 MOSPD2Q8NHP6 518 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 ZPLD1Q8TCW7 415 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 CCDC74BQ96LY2 380 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 ALG8Q9BVK2 526 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms