RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 RTN4RQ9BZR6 473 aa8.61□□□□□ -1.03
LRTM1-201ENST00000273286 ACTR6Q9GZN1 396 aa8.61□□□□□ -1.03
LRTM1-201ENST00000273286 ESRP2Q9H6T0 727 aaKnown RBP8.61□□□□□ -1.03
LRTM1-201ENST00000273286 PPCSQ9HAB8 311 aa8.61□□□□□ -1.03
LRTM1-201ENST00000273286 ACSS1Q9NUB1 689 aaPredicted RBP8.61□□□□□ -1.03
LRTM1-201ENST00000273286 ING3Q9NXR8 418 aa8.61□□□□□ -1.03
LRTM1-201ENST00000273286 MID2Q9UJV3 735 aa8.61□□□□□ -1.03
LRTM1-201ENST00000273286 TMED5Q9Y3A6 229 aa8.61□□□□□ -1.03
LRTM1-201ENST00000273286 POLR3HQ9Y535 204 aaPredicted RBP8.61□□□□□ -1.03
LRTM1-201ENST00000273286 USF3Q68DE3 2245 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 COL6A5A8TX70 2615 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 A0A1W2PRB8 838 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 C17orf51A8MQB3 221 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 SLC28A1O00337 649 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 RIPK2O43353 540 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 SEC22BO75396 215 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 OXSR1O95747 527 aaPredicted RBP8.6□□□□□ -1.03
LRTM1-201ENST00000273286 CHEK2O96017 543 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 GCAP28676 217 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 PCSK6P29122 969 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 RPL3P39023 403 aaKnown RBP8.6□□□□□ -1.03
LRTM1-201ENST00000273286 FRKP42685 505 aaPredicted RBP8.6□□□□□ -1.03
LRTM1-201ENST00000273286 ASMTP46597 345 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 CCT5P48643 541 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 MANFP55145 182 aaKnown RBP8.6□□□□□ -1.03
LRTM1-201ENST00000273286 FOXA1P55317 472 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 SUMO3P55854 103 aaPredicted RBP8.6□□□□□ -1.03
LRTM1-201ENST00000273286 ATP5J2P56134 94 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 DNAJB13P59910 316 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 HSPB3Q12988 150 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 CTU2Q2VPK5 515 aaKnown RBP8.6□□□□□ -1.03
LRTM1-201ENST00000273286 PLPPR5Q32ZL2 321 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 HBMQ6B0K9 141 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 LRIG3Q6UXM1 1119 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 ZYG11AQ6WRX3 759 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 R3HCC1LQ7Z5L2 792 aaKnown RBP8.6□□□□□ -1.03
LRTM1-201ENST00000273286 ZNF527Q8NB42 609 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 PIK3C3Q8NEB9 887 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 OR5M1Q8NGP8 315 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 SLC25A43Q8WUT9 341 aaPredicted RBP8.6□□□□□ -1.03
LRTM1-201ENST00000273286 ST8SIA2Q92186 375 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 SLC9A6Q92581 669 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 PPCDCQ96CD2 204 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 TRMOQ9BU70 441 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 LRTM1Q9HBL6 345 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 DUSP22Q9NRW4 184 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 MED17Q9NVC6 651 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 C1orf109Q9NX04 203 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 GIN1Q9NXP7 522 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 FLRT3Q9NZU0 649 aa8.6□□□□□ -1.03
LRTM1-201ENST00000273286 FBN3Q75N90 2809 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 ZANQ9Y493 2812 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 HEATR5AQ86XA9 2040 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 INAFM1C9JVW0 142 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 H3BNH8 94 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 UBFD1O14562 309 aaKnown RBP8.59□□□□□ -1.03
LRTM1-201ENST00000273286 CXCL13O43927 109 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 KCNK2O95069 426 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 KRT16P08779 473 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 ALOX5P09917 674 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 KRT4P19013 534 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 PSMA4P25789 261 aaKnown RBP8.59□□□□□ -1.03
LRTM1-201ENST00000273286 AGTR1P30556 359 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 IDUAP35475 653 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 PRIM2P49643 509 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 CARD18P57730 90 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 SLC18A2Q05940 514 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 MLC1Q15049 377 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 KIAA0040Q15053 153 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 P2RY6Q15077 328 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 ZNF239Q16600 458 aaKnown RBP8.59□□□□□ -1.03
LRTM1-201ENST00000273286 APOOLQ6UXV4 268 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 ZNF551Q7Z340 670 aaPredicted RBP8.59□□□□□ -1.03
LRTM1-201ENST00000273286 SZRD1Q7Z422 152 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 GALNT10Q86SR1 603 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 PRIMA1Q86XR5 153 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 SLC43A2Q8N370 569 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 NATD1Q8N6N6 113 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 OR4C3Q8NH37 302 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 B4GALNT2Q8NHY0 566 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 FAM110BQ8TC76 370 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 RNF128Q8TEB7 428 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 HSD17B8Q92506 261 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 PIK3R3Q92569 461 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 OSTF1Q92882 214 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 KLHL15Q96M94 604 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 RNF145Q96MT1 663 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 STACQ99469 402 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 HOXD1Q9GZZ0 328 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 PIF1Q9H611 641 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 REEP4Q9H6H4 257 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 EQTNQ9NQ60 294 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 KLHL13Q9P2N7 655 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 RNF115Q9Y4L5 304 aa8.59□□□□□ -1.03
LRTM1-201ENST00000273286 GXYLT2A0PJZ3 443 aa8.58□□□□□ -1.04
LRTM1-201ENST00000273286 TMEM114B3SHH9 223 aa8.58□□□□□ -1.04
LRTM1-201ENST00000273286 G3V2L1 256 aa8.58□□□□□ -1.04
LRTM1-201ENST00000273286 GOLGA8RI6L899 631 aa8.58□□□□□ -1.04
LRTM1-201ENST00000273286 TNFSF11O14788 317 aa8.58□□□□□ -1.04
LRTM1-201ENST00000273286 CRLF1O75462 422 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms