RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 BORAQ6PGQ7 559 aa12.37□□□□□ -0.43
SMG9-201ENST00000270066 ZNF322Q6U7Q0 402 aaPredicted RBP12.37□□□□□ -0.43
SMG9-201ENST00000270066 KIAA0907Q7Z7F0 614 aaPredicted RBP12.37□□□□□ -0.43
SMG9-201ENST00000270066 UBALD2Q8IYN6 164 aa12.37□□□□□ -0.43
SMG9-201ENST00000270066 TMEM178AQ8NBL3 297 aa12.37□□□□□ -0.43
SMG9-201ENST00000270066 CHDHQ8NE62 594 aaPredicted RBP12.37□□□□□ -0.43
SMG9-201ENST00000270066 TM4SF18Q96CE8 201 aa12.37□□□□□ -0.43
SMG9-201ENST00000270066 AMDHD1Q96NU7 426 aa12.37□□□□□ -0.43
SMG9-201ENST00000270066 LTBP4Q8N2S1 1624 aa12.37□□□□□ -0.43
SMG9-201ENST00000270066 A0A1B0GX78 115 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 A0A1W2PQL4 384 aaPredicted RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 OR5K3A6NET4 321 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 RRP8O43159 456 aaKnown RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 AKR1C4P17516 323 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 RGS19P49795 217 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 EXT1Q16394 746 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 LHX8Q68G74 356 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 SFRP4Q6FHJ7 346 aaPredicted RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 OR5M10Q6IEU7 315 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 PGM2L1Q6PCE3 622 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 PAPD4Q6PIY7 484 aaKnown RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 LMNTD1Q8N9Z9 388 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 MUCL1Q96DR8 90 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 PDXPQ96GD0 296 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 TNRC6CQ9HCJ0 1690 aaKnown RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 CDK1P06493 297 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 POU4F3Q15319 338 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 KCTD20Q7Z5Y7 419 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 FAM160A2Q8N612 972 aaPredicted RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 NPRL2Q8WTW4 380 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 P2RY12Q9H244 342 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 CCDC86Q9H6F5 360 aaKnown RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 OR2S2Q9NQN1 319 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 CXXC1Q9P0U4 656 aaPredicted RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 INTS6Q9UL03 887 aaKnown RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 YY2O15391 372 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 CD34P28906 385 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 BCL6P41182 706 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 CXCR4P61073 352 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 MBTPS1Q14703 1052 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 RTL6Q6ICC9 239 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 BEST3Q8N1M1 668 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 CACNG6Q9BXT2 260 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 LYRM4Q9HD34 91 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 MBNL1Q9NR56 388 aaKnown RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 MED17Q9NVC6 651 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 SSC5DA1L4H1 1573 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 TVP23AA6NH52 213 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 UTS2O95399 124 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 IGLV3-27P01718 113 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 DRD5P21918 477 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 OR1D5P58170 312 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 PFN3P60673 137 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 LAMA4Q16363 1823 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 TMEM176BQ3YBM2 270 aaPredicted RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 SLC48A1Q6P1K1 146 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 ABHD17CQ6PCB6 329 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 CMTM1Q8IZ96 169 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 LSMEM2Q8N112 164 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 OR1E3Q8WZA6 343 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 C6orf106Q9H6K1 298 aaPredicted RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 A4GALTQ9NPC4 353 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 WASH6PQ9NQA3 447 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 PLEKHJ1Q9NW61 149 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 EMC9Q9Y3B6 208 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 DCDC2BA2VCK2 349 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 MRPS10P82664 201 aaKnown RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 FAM111BQ6SJ93 734 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 OR2T11Q8NH01 316 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 OR51E2Q9H255 320 aa12.36□□□□□ -0.43
SMG9-201ENST00000270066 DHCR7Q9UBM7 475 aaKnown RBP12.36□□□□□ -0.43
SMG9-201ENST00000270066 MYH14Q7Z406 1995 aaKnown RBP12.35□□□□□ -0.43
SMG9-201ENST00000270066 TARM1B6A8C7 271 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 ATP1B3P54709 279 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 C18orf63Q68DL7 685 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 ELP2Q6IA86 826 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 PDZD9Q8IXQ8 264 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 LYSMD1Q96S90 227 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 PIGQQ9BRB3 760 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 TAF1P21675 1872 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 TAPBPO15533 448 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 OPN1LWP04000 364 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 CSF1P09603 554 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 ACP2P11117 423 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 TACR3P29371 465 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 OPRD1P41143 372 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 EIF1P41567 113 aaKnown RBP12.35□□□□□ -0.43
SMG9-201ENST00000270066 PYCR3Q53H96 274 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 PLCXD3Q63HM9 321 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 VASNQ6EMK4 673 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 FRMPD2BQ6IN97 320 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 MTFR2Q6P444 385 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 MEX3DQ86XN8 651 aaKnown RBP12.35□□□□□ -0.43
SMG9-201ENST00000270066 CMIPQ8IY22 773 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 TXNDC15Q96J42 360 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 SLC41A2Q96JW4 573 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 FAM230AA0A1W2PPH8 454 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 NAP1L6A6NFF2 107 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 ALOX12BO75342 701 aa12.35□□□□□ -0.43
SMG9-201ENST00000270066 IFNA1P01562 189 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms