RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 FKBP9P1Q75LS8 142 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 OR6S1Q8NH40 331 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 STK35Q8TDR2 534 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 CANT1Q8WVQ1 401 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 SLCO4A1Q96BD0 722 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 RAB3IPQ96QF0 476 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-201ENST00000265304 FUZQ9BT04 418 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 TMEM43Q9BTV4 400 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 TSPAN10Q9H1Z9 355 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-201ENST00000265304 CTPS2Q9NRF8 586 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 MAN2C1Q9NTJ4 1040 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 RIMS3Q9UJD0 308 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 SLC6A5Q9Y345 797 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 FASNP49327 2511 aaKnown RBP12.85□□□□□ -0.35
SSBP1-201ENST00000265304 TMED7-TICAM2A0A0A6YYA0 188 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 A0A1W2PRQ8 180 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 DHRS12A0PJE2 317 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 PRB1P04280 392 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 RAP2AP10114 183 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 IL11P20809 199 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 PTGS2P35354 604 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 EGR4Q05215 589 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 PIN1Q13526 163 aaPredicted RBP12.85□□□□□ -0.35
SSBP1-201ENST00000265304 DGCR6Q14129 220 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 GK3PQ14409 553 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 TOMM20Q15388 145 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 FAM98BQ52LJ0 330 aaKnown RBP12.85□□□□□ -0.35
SSBP1-201ENST00000265304 ALG10BQ5I7T1 473 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 DCST1Q5T197 706 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 RAET1LQ5VY80 246 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 C3orf33Q6P1S2 294 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 ESPNLQ6ZVH7 1005 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 GDF7Q7Z4P5 450 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 LILRA2Q8N149 483 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 VANGL1Q8TAA9 524 aaPredicted RBP12.85□□□□□ -0.35
SSBP1-201ENST00000265304 FAM57AQ8TBR7 257 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 ZPLD1Q8TCW7 415 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 LRGUKQ96M69 825 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 ZNF347Q96SE7 839 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 SLC19A3Q9BZV2 496 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 LDAHQ9H6V9 325 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 SERINC1Q9NRX5 453 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 ARMC1Q9NVT9 282 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 TRAPPC4Q9Y296 219 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 RPH3AQ9Y2J0 694 aaPredicted RBP12.85□□□□□ -0.35
SSBP1-201ENST00000265304 TMED7Q9Y3B3 224 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 HDGFL3Q9Y3E1 203 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 SPIN1Q9Y657 262 aaPredicted RBP12.85□□□□□ -0.35
SSBP1-201ENST00000265304 LRRK2Q5S007 2527 aa12.85□□□□□ -0.35
SSBP1-201ENST00000265304 FREM1Q5H8C1 2179 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 IGKV1D-42A0A075B6H8 117 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 GJE1A6NN92 205 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 A8MVM7 634 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 AHRRA9YTQ3 701 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 SHISA8B8ZZ34 492 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 DNPH1O43598 174 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 GMFGO60234 142 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 SLC7A1P30825 629 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 PTGER4P35408 488 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 RBM34P42696 430 aaKnown RBP12.84□□□□□ -0.35
SSBP1-201ENST00000265304 LIMS1P48059 325 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 SUCLG1P53597 346 aaKnown RBP12.84□□□□□ -0.35
SSBP1-201ENST00000265304 TLE1Q04724 770 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 CHRNB3Q05901 458 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 ST3GAL3Q11203 375 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 GXYLT1Q4G148 440 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 SYT14P1Q58G82 188 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 C1orf146Q5VVC0 180 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 GFRALQ6UXV0 394 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 C10orf67Q8IYJ2 551 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 PM20D2Q8IYS1 436 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 OR5M1Q8NGP8 315 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 SLC41A3Q96GZ6 507 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 HS6ST2Q96MM7 605 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 PIP5K1AQ99755 562 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 DENND2DQ9H6A0 471 aaPredicted RBP12.84□□□□□ -0.35
SSBP1-201ENST00000265304 NMNAT1Q9HAN9 279 aaPredicted RBP12.84□□□□□ -0.35
SSBP1-201ENST00000265304 PAQR5Q9NXK6 330 aaPredicted RBP12.84□□□□□ -0.35
SSBP1-201ENST00000265304 DOPEY1Q5JWR5 2465 aa12.84□□□□□ -0.35
SSBP1-201ENST00000265304 A0A0J9YW62 118 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 RRP9O43818 475 aaKnown RBP12.83□□□□□ -0.36
SSBP1-201ENST00000265304 WDR1O75083 606 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 CIB2O75838 187 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 KRT36O76013 467 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 FABP3P05413 133 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 STSP08842 583 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 CXCR1P25024 350 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 SHC1P29353 583 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 STARP49675 285 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 CLDN20P56880 219 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 H3F3AP84243 136 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 HSF1Q00613 529 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 ZNF239Q16600 458 aaKnown RBP12.83□□□□□ -0.36
SSBP1-201ENST00000265304 WDR88Q6ZMY6 472 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 TMPPEQ6ZT21 453 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 ZDHHC21Q8IVQ6 265 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 RNF113BQ8IZP6 322 aaKnown RBP12.83□□□□□ -0.36
SSBP1-201ENST00000265304 CADM2Q8N3J6 435 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 LIPHQ8WWY8 451 aa12.83□□□□□ -0.36
SSBP1-201ENST00000265304 KLHL15Q96M94 604 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms