RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 FESP07332 822 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 OR3A2P47893 321 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 DSTNP60981 165 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 PPP2R2AP63151 447 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 P2RY6Q15077 328 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 PDK3Q15120 406 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 ACKR1Q16570 336 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 MRPL2Q5T653 305 aaKnown RBP14.27□□□□□ -0.13
USE1-201ENST00000263897 HDXQ7Z353 690 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 OR52P1PQ8NH57 321 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 ZNF300Q96RE9 604 aaPredicted RBP14.27□□□□□ -0.13
USE1-201ENST00000263897 EBF4Q9BQW3 602 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 CCDC28BQ9BUN5 200 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 OR11A1Q9GZK7 315 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 PAIP1Q9H074 479 aaKnown RBP14.27□□□□□ -0.13
USE1-201ENST00000263897 THUMPD1Q9NXG2 353 aaKnown RBP14.27□□□□□ -0.13
USE1-201ENST00000263897 OSGIN1Q9UJX0 560 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 TRAPPC4Q9Y296 219 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 TMED7Q9Y3B3 224 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 HDGFL3Q9Y3E1 203 aa14.27□□□□□ -0.13
USE1-201ENST00000263897 DSPPQ9NZW4 1301 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.26□□□□□ -0.13
USE1-201ENST00000263897 CDHR4A6H8M9 788 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 CFAP73A6NFT4 308 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 CLIC1O00299 241 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 CCNA2P20248 432 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 FPR1P21462 350 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 TACR3P29371 465 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 HOXC12P31275 282 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 SLC1A3P43003 542 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 POLR2HP52434 150 aaKnown RBP14.26□□□□□ -0.13
USE1-201ENST00000263897 MAP2K6P52564 334 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 CRISP3P54108 245 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 STX1BP61266 288 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 EPS8Q12929 822 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 ITGADQ13349 1161 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 RGNQ15493 299 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 TSC22D1Q15714 1073 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 SLC2A7Q6PXP3 512 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 BLOC1S3Q6QNY0 202 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 Q6ZT83 130 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 GALNT5Q7Z7M9 940 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 VRK2Q86Y07 508 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 WFDC8Q8IUA0 241 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 FUNDC1Q8IVP5 155 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 ZNF440Q8IYI8 595 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 PIGTQ969N2 578 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 S100PBPQ96BU1 408 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 ZHX1-C8orf76Q96EF9 292 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 PIP5K1AQ99755 562 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 ADAM19Q9H013 955 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 RLIMQ9NVW2 624 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 ZNF232Q9UNY5 417 aa14.26□□□□□ -0.13
USE1-201ENST00000263897 IGKV3D-15A0A087WSY6 115 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 A0A0G2JPF8 293 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 HMGB1P1B2RPK0 211 aaPredicted RBP14.25□□□□□ -0.13
USE1-201ENST00000263897 HNRNPCL2B2RXH8 293 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 HNRNPCL3B7ZW38 293 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 ZNF208O43345 1280 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 DNPH1O43598 174 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 HNRNPCL1O60812 293 aaKnown RBP14.25□□□□□ -0.13
USE1-201ENST00000263897 BCHEP06276 602 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 HNRNPCL4P0DMR1 293 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 UQCRBP14927 111 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 IL32P24001 234 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 ACAA2P42765 397 aaKnown RBP14.25□□□□□ -0.13
USE1-201ENST00000263897 NR1H2P55055 460 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 AQP5P55064 265 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 FOXD4Q12950 439 aaPredicted RBP14.25□□□□□ -0.13
USE1-201ENST00000263897 ABLIM2Q6H8Q1 611 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 ZNF836Q6ZNA1 936 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 GOLGA6L1Q8N7Z2 621 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 DYDC1Q8WWB3 177 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 HSD17B8Q92506 261 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 KISS1RQ969F8 398 aaPredicted RBP14.25□□□□□ -0.13
USE1-201ENST00000263897 DNAJA3Q96EY1 480 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 PLPPR2Q96GM1 343 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 USB1Q9BQ65 265 aaKnown RBP14.25□□□□□ -0.13
USE1-201ENST00000263897 VIPAS39Q9H9C1 493 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 UBTD1Q9HAC8 227 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 SLC52A3Q9NQ40 469 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 INTS9Q9NV88 658 aaKnown RBP14.25□□□□□ -0.13
USE1-201ENST00000263897 TMEM181Q9P2C4 612 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 PRSS50Q9UI38 385 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 CADP27708 2225 aa14.25□□□□□ -0.13
USE1-201ENST00000263897 RAI1Q7Z5J4 1906 aaPredicted RBP14.24□□□□□ -0.13
USE1-201ENST00000263897 A0A096LPI6 279 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 TMEM72A0PK05 275 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 TMEM247A6NEH6 219 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 ZNF716A6NP11 495 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 CNOT4O95628 575 aaKnown RBP14.24□□□□□ -0.13
USE1-201ENST00000263897 GKN3PP0CG01 181 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 BMP2P12643 396 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 HOXB9P17482 250 aaPredicted RBP14.24□□□□□ -0.13
USE1-201ENST00000263897 EDNRAP25101 427 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 RIPPLY3P57055 190 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 OR2B6P58173 313 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 NKX6-1P78426 367 aaPredicted RBP14.24□□□□□ -0.13
USE1-201ENST00000263897 H3F3AP84243 136 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 LARS2Q15031 903 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms