RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 CSNK1A1P48729 337 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 EMX1Q04741 257 aaPredicted RBP16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 MGAT3Q09327 533 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 ZNF252P-AS1Q0IIN9 211 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 SLC35G1Q2M3R5 365 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 LANCL3Q6ZV70 420 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 NPIPB15A6NHN6 443 aaPredicted RBP16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 ETV5P41161 510 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 TMEM151BQ8IW70 566 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 CNTNAP3Q9BZ76 1288 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 SAGE1Q9NXZ1 904 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 HAO2Q9NYQ3 351 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 TXNL1O43396 289 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 FZD7O75084 574 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 ACPPP15309 386 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 MSMO1Q15800 293 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 LRRC56Q8IYG6 542 aaPredicted RBP16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 A0A1W2PPV4 95 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 PLSCR5A0PG75 271 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 IGHG1P01857 330 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 RAB33AQ14088 237 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 BSCL2Q96G97 398 aaPredicted RBP16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 GCH1P30793 250 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 SLC10A1Q14973 349 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 ENTPD8Q5MY95 495 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 SLC35F3Q8IY50 421 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 FAM160A2Q8N612 972 aaPredicted RBP16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 MIB2Q96AX9 1013 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 CRB3Q9BUF7 120 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 PLEK2Q9NYT0 353 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 DNAJB11Q9UBS4 358 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 BCORQ6W2J9 1755 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 FAM171A2A8MVW0 826 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 PRAMEF26H0Y7S4 382 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 ZNF140P52738 457 aaPredicted RBP16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 B3GNT8Q7Z7M8 397 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 ZNF416Q9BWM5 594 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 ADAM19Q9H013 955 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 SLC25A18Q9H1K4 315 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 GDE1Q9NZC3 331 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 GABRR3A8MPY1 467 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 ARNTLO00327 626 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 LAMTOR5O43504 91 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 CHRNB4P30926 498 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 LTBQ06643 244 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 PLCXD3Q63HM9 321 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 SIAH1Q8IUQ4 282 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 ZBTB8AQ96BR9 441 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 PAAF1Q9BRP4 392 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 NOX3Q9HBY0 568 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 INIPQ9NRY2 104 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 RHBDD3Q9Y3P4 386 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 E9PI62 339 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 NUDT1P36639 197 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 OR7A5Q15622 319 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 NANPQ8TBE9 248 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 ZFP90Q8TF47 636 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 IL23AQ9NPF7 189 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 NCDNQ9UBB6 729 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 AKAP6Q13023 2319 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 USP53Q70EK8 1073 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 SDR9C7Q8NEX9 313 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 TREX1Q9NSU2 369 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 CUTCQ9NTM9 273 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 DLEC1Q9Y238 1755 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 STK17BO94768 372 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 MT-ND4P03905 459 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 FOLR3P41439 243 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 EXOSC6Q5RKV6 272 aaKnown RBP16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 GLB1L2Q8IW92 636 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 OR6T1Q8NGN1 323 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 SFXN2Q96NB2 322 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 KIR2DS5A0A0G2JLQ3 304 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 A0A0G2JNG1 304 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 KIR2DS3K7RE56 304 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 KIR2DS5Q14953 304 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 DPPA4Q7L190 304 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 MED17Q9NVC6 651 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 C1orf123Q9NWV4 160 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 CLDN24A6NM45 220 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 AGAP14A8MT82 685 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 ONECUT3O60422 494 aaPredicted RBP16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 CPT2P23786 658 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 ESCO2Q56NI9 601 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 OR8J2Q8NGG1 315 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 TUBB1Q9H4B7 451 aa16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 FAM212BQ9NTI7 297 aaPredicted RBP16.36■□□□□ 0.21
NOTCH3-201ENST00000263388 A6NHS1 94 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 A8MVM7 634 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 ZNF780AO75290 641 aaPredicted RBP16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 RNF113BQ8IZP6 322 aaKnown RBP16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 RPS5P46782 204 aaKnown RBP16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 DUSP7Q16829 419 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 HIST2H3PS2Q5TEC6 136 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 RTL10Q7L3V2 364 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 DTD2Q96FN9 168 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 ANKRD34BA5PLL1 514 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 HOXD12P35452 270 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 FOXA1P55317 472 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 GPR18Q14330 331 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms