RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 MTNR1BP49286 362 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 TNFRSF17Q02223 184 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 OC90Q02509 493 aaPredicted RBP8.42□□□□□ -1.06
MSH4-201ENST00000263187 KCNAB1Q14722 419 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 ST3GAL2Q16842 350 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 TMEM255AQ5JRV8 349 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 STPG1Q5TH74 334 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 POMZP3Q6PJE2 187 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 RNF44Q7L0R7 432 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 PARGQ86W56 976 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 PLCZ1Q86YW0 608 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 GID4Q8IVV7 300 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 DNAAF1Q8NEP3 725 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 LGALS14Q8TCE9 139 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 CREB3L1Q96BA8 519 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 OMA1Q96E52 524 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 IL23AQ9NPF7 189 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 POT1Q9NUX5 634 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 FLRT3Q9NZU0 649 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 ING4Q9UNL4 249 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 SIGLEC7Q9Y286 467 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 A0A0G2JK05 382 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 TRBV2A0A0J9YWF9 115 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 PRSS38A1L453 326 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 J3QRE1 110 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 SMAD9O15198 467 aaKnown RBP8.42□□□□□ -1.06
MSH4-201ENST00000263187 GMDSO60547 372 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 RAD1O60671 282 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 ZNF250P15622 560 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 F8A1P23610 371 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 EDNRAP25101 427 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 TLX1P31314 330 aaPredicted RBP8.42□□□□□ -1.06
MSH4-201ENST00000263187 ARPC4P59998 168 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 PLAURQ03405 335 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 C10orf53Q8N6V4 93 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 SRFBP1Q8NEF9 429 aaKnown RBP8.42□□□□□ -1.06
MSH4-201ENST00000263187 RAB7BQ96AH8 199 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 DPAGT1Q9H3H5 408 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 SLCO1C1Q9NYB5 712 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 STMN3Q9NZ72 180 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 KLK11Q9UBX7 282 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 ZNF223Q9UK11 482 aaPredicted RBP8.42□□□□□ -1.06
MSH4-201ENST00000263187 DAPP1Q9UN19 280 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 TDRD6O60522 2096 aaKnown RBP8.42□□□□□ -1.06
MSH4-201ENST00000263187 A0A1B0GWA3 101 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 H7C1C5 153 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 I3L521 148 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 CA3P07451 260 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 HNRNPA1P09651 372 aaKnown RBP eCLIP8.42□□□□□ -1.06
MSH4-201ENST00000263187 GDI2P50395 445 aaKnown RBP8.42□□□□□ -1.06
MSH4-201ENST00000263187 CCR4P51679 360 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 LCN6P62502 163 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 SNTB2Q13425 540 aaKnown RBP8.42□□□□□ -1.06
MSH4-201ENST00000263187 TNK1Q13470 666 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 ARHGAP11BQ3KRB8 267 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 AMZ1Q400G9 498 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 ALG10BQ5I7T1 473 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 ZNF425Q6IV72 752 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 HEPHL1Q6MZM0 1159 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 KANSL1Q7Z3B3 1105 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 GJD3Q8N144 294 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 ZNF619Q8N2I2 560 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 FAM109AQ8N4B1 249 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 FAM3CQ92520 227 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 MOAP1Q96BY2 351 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 RASD2Q96D21 266 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 ZC3HAV1LQ96H79 300 aaKnown RBP8.42□□□□□ -1.06
MSH4-201ENST00000263187 PGLYRP3Q96LB9 341 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 RCE1Q9Y256 329 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 LEUTXA8MZ59 168 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 MCIDASD6RGH6 385 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 H0YGG7 62 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 OR10H2O60403 315 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 RDH16O75452 317 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 ZNF3P17036 446 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 NPR2P20594 1047 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 LSSP48449 732 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 RGS19P49795 217 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 SELENOPP49908 381 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 ARF3P61204 181 aaPredicted RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 ERVK-25P63136 954 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 RPS21P63220 83 aaKnown RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 BICRALQ6AI39 1079 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 METAP1DQ6UB28 335 aaPredicted RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 CHMP1BQ7LBR1 199 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 PAQR7Q86WK9 346 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 OR2L13Q8N349 312 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 LNX2Q8N448 690 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 GALNT6Q8NCL4 622 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 OR52R1Q8NGF1 315 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 YIPF5Q969M3 257 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 GAL3ST3Q96A11 431 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 HYLS1Q96M11 299 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 SEC22CQ9BRL7 303 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 GTPBP2Q9BX10 602 aaKnown RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 TSPAN10Q9H1Z9 355 aaPredicted RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 NARFLQ9H6Q4 476 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 METTL17Q9H7H0 456 aaPredicted RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 NIPAL2Q9H841 368 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 TMEM27Q9HBJ8 222 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms