RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 BCL6P41182 706 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 DHRS13Q6UX07 377 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 STOML3Q8TAV4 291 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 HDAC2Q92769 488 aaKnown RBP12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 ITGB4P16144 1822 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 ADAM23O75077 832 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 MPIG6BO95866 241 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 PPP2CBP62714 309 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 PPP2CAP67775 309 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 HENMT1Q5T8I9 393 aaKnown RBP12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 METRNLQ641Q3 311 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 Q6ZS52 159 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 KIF18BQ86Y91 864 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 CMIPQ8IY22 773 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 BCL7CQ8WUZ0 217 aaPredicted RBP12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 CRISPLD2Q9H0B8 497 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 P2RY12Q9H244 342 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 RLIMQ9NVW2 624 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 DPY19L4Q7Z388 723 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 ZNF417Q8TAU3 575 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 CCDC106Q9BWC9 280 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 YARS2Q9Y2Z4 477 aaKnown RBP12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 H0YIG0 161 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 IMPA1P29218 277 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 FXYD4P59646 89 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 LEXMQ3ZCV2 418 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 MARCH3Q86UD3 253 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 TMEM9Q9P0T7 183 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 TBC1D29Q9UFV1 150 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 PPT2Q9UMR5 302 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 EME2A4GXA9 379 aaPredicted RBP12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 KDM4EB2RXH2 506 aaPredicted RBP12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 FGF4P08620 206 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 LIM2P55344 173 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 PGBD5Q8N414 524 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 LINC01465Q8N7H1 131 aa12.63□□□□□ -0.39
PDGFRB-201ENST00000261799 DVL2O14641 736 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 MAGEA12P43365 314 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 NTRK2Q16620 822 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 SLC6A19Q695T7 634 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 PXKQ7Z7A4 578 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 ZNF224Q9NZL3 707 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 STUB1Q9UNE7 303 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 NME7Q9Y5B8 376 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 PRICKLE3O43900 615 aaPredicted RBP12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 PRKYO43930 277 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 SERPINE2P07093 398 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 HTR4Q13639 388 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 MRPL58Q14197 206 aaKnown RBP12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 MRPL2Q5T653 305 aaKnown RBP12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 OR13J1Q8NGT2 312 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 GLYATL2Q8WU03 294 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 UBTD2Q8WUN7 234 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 ZNF681Q96N22 645 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 LIN28AQ9H9Z2 209 aaKnown RBP12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 GPR52Q9Y2T5 361 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 TRAV27A0A087WT01 109 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 TYROBPO43914 113 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 SRP14P37108 136 aaKnown RBP12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 VEZF1Q14119 521 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 SMAD2Q15796 467 aaKnown RBP12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 TMEM196Q5HYL7 178 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 MINDY2Q8NBR6 621 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 OR1S1Q8NH92 325 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 IL1F10Q8WWZ1 152 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 FBXL20Q96IG2 436 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 SMIM14Q96QK8 99 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 LMF1Q96S06 567 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 CENPOQ9BU64 300 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 TRAV17A0A0B4J275 112 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 IDSB3KWA1 339 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 GABRG2P18507 467 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 MSR1P21757 451 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 PTGER1P34995 402 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 ACTBP60709 375 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 ACTG1P63261 375 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 YRDCQ86U90 279 aaKnown RBP12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 FBXL14Q8N1E6 418 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 WFDC5Q8TCV5 224 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 CA5BP1Q8WTZ4 195 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 TUBA1CQ9BQE3 449 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 ZFP57Q9NU63 452 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 OR51B4Q9Y5P0 310 aa12.62□□□□□ -0.39
PDGFRB-201ENST00000261799 USP54Q70EL1 1684 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 SMIM30A4D0T7 59 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 MEN1O00255 615 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 FRS3O43559 492 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 GABBR2O75899 941 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 RAB3BP20337 219 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 CRHBPP24387 322 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 APOBEC1P41238 236 aaKnown RBP12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 UCNP55089 124 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 BIDP55957 195 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 PIN1Q13526 163 aaPredicted RBP12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 TP53I3Q53FA7 332 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 RAB12Q6IQ22 244 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 ZNF773Q6PK81 442 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 NETO1Q8TDF5 533 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 SLC30A2Q9BRI3 323 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 GSTO2Q9H4Y5 243 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms