RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 TTC9BQ8N6N2 239 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 OR7G1Q8NGA0 311 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 C7orf43Q8WVR3 580 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 MICU1Q9BPX6 476 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 XYLT2Q9H1B5 865 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 RETREG1Q9H6L5 497 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 FOXA1P55317 472 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 GPR18Q14330 331 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 MSMO1Q15800 293 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 LYSMD4Q5XG99 296 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 OR4M1Q8NGD0 313 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 STT3BQ8TCJ2 826 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 MITD1Q8WV92 249 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 PCYT2Q99447 389 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 VN1R3Q9BXE9 311 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 GLTPQ9NZD2 209 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 ZNF337Q9Y3M9 751 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 E9PI62 339 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 NFKBIEO00221 500 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 EGFP01133 1207 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 IGHG1P01857 330 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 THBS3P49746 956 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 YIF1BQ5BJH7 314 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 METAP1DQ6UB28 335 aaPredicted RBP13.37□□□□□ -0.27
CUX2-201ENST00000261726 C16orf70Q9BSU1 422 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 ELOVL3Q9HB03 270 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 SPO11Q9Y5K1 396 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 PRAMEF26H0Y7S4 382 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 H3BQ06 376 aaPredicted RBP13.37□□□□□ -0.27
CUX2-201ENST00000261726 MSTNO14793 375 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 FCGR2AP12318 317 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 PVRP15151 417 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 M6PRP20645 277 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 HSD17B7P56937 341 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 IKZF1Q13422 519 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 GRAMD2AQ8IUY3 354 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 DTWD1Q8N5C7 304 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 H1FXQ92522 213 aaKnown RBP13.37□□□□□ -0.27
CUX2-201ENST00000261726 CBLCQ9ULV8 474 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 COPS3Q9UNS2 423 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 ANKRD36CQ5JPF3 1778 aa13.37□□□□□ -0.27
CUX2-201ENST00000261726 NSG1A0A0A6YYJ2 146 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 RNASET2O00584 256 aaKnown RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 MRPL33O75394 65 aaKnown RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 CRYZL1O95825 349 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 TP53P04637 393 aaPredicted RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 HMGN2P05204 90 aaKnown RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 PKLRP30613 574 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 RAB5CP51148 216 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 SIMC1Q8NDZ2 872 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 WWTR1Q9GZV5 400 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 ZNF286AQ9HBT8 521 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 GFOD1Q9NXC2 390 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 GAPDHSO14556 408 aaPredicted RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 DVL1O14640 695 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 OR2T1O43869 369 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 PRAF2O60831 178 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 F13BP05160 661 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 TGM4P49221 684 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 DVL1P1P54792 670 aaPredicted RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 NDUFA6P56556 154 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 APOOLQ6UXV4 268 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 TOE1Q96GM8 510 aaKnown RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 MRI1Q9BV20 369 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 TMEM59Q9BXS4 323 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 BTNL2Q9UIR0 455 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 NPC1O15118 1278 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 TK1P04183 234 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 HTR3AP46098 478 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 UBE2KP61086 200 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 SORDQ00796 357 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 C3orf49Q96BT1 292 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 ZNF486Q96H40 463 aaPredicted RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 HEBP1Q9NRV9 189 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 HCFC1R1Q9NWW0 138 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 HHLA2Q9UM44 414 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 SERPINF1P36955 418 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 ATPAF1Q5TC12 328 aaPredicted RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 C6orf89Q6UWU4 347 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 PDZD3Q86UT5 571 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 FAM160A2Q8N612 972 aaPredicted RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 OCSTAMPQ9BR26 566 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 SGPP1Q9BX95 441 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 ZNF436Q9C0F3 470 aaPredicted RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 SNAPINO95295 136 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 ANXA7P20073 488 aaKnown RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 BMPR1AP36894 532 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 JAG1P78504 1218 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 LCTLQ6UWM7 567 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 SLC16A14Q7RTX9 510 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 OR4A16Q8NH70 328 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 INTS6Q9UL03 887 aaKnown RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 ZNF891A8MT65 544 aaPredicted RBP13.36□□□□□ -0.27
CUX2-201ENST00000261726 IL1AP01583 271 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 PRPH2P23942 346 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 TACR3P29371 465 aa13.36□□□□□ -0.27
CUX2-201ENST00000261726 S100A7P31151 101 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms