RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 SYT14P1Q58G82 188 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 MRPL2Q5T653 305 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 PRR22Q8IZ63 422 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 HIPK4Q8NE63 616 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 TP53INP1Q96A56 240 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 WBP1Q96G27 269 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 KLHDC7BQ96G42 594 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 HMG20AQ9NP66 347 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 HINT3Q9NQE9 182 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 C6orf203Q9P0P8 240 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 FBXW2Q9UKT8 454 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF232Q9UNY5 417 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 RNF103-CHMP3A0A140T963 221 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 A0A1B0GWJ7 208 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 H3BSA7 217 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 DLL1O00548 723 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 PGDP52209 483 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 HSPB3Q12988 150 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 TARDBPQ13148 414 aaKnown RBP eCLIP5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 PLPPR5Q32ZL2 321 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 ZMAT1Q5H9K5 638 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 HDDC2Q7Z4H3 204 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 ADCK2Q7Z695 626 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 SCAIQ8N9R8 606 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 CDC26Q8NHZ8 85 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 ZCCHC10Q8TBK6 192 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 ADAMTS18Q8TE60 1221 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 OR6C1Q96RD1 312 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 WWTR1Q9GZV5 400 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 ST6GALNAC2Q9UJ37 374 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 CARD8Q9Y2G2 431 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 TMED5Q9Y3A6 229 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 SESN1Q9Y6P5 492 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 IGLV1-36A0A0B4J1U3 117 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 ATXN7O15265 892 aaPredicted RBP5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 TRAF3IP2O43734 574 aaPredicted RBP5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 FKBP9O95302 570 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 GPR75O95800 540 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 AGR2O95994 175 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 IGHA1P01876 353 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 RPLP0P05388 317 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 STSP08842 583 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 ACADSP16219 412 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 ALOX12P18054 663 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 TSFMP43897 325 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 EXOC3L2Q2M3D2 409 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 TMEM81Q6P7N7 255 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 TIGD4Q8IY51 512 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 TMEM123Q8N131 208 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 OR6V1Q8N148 313 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 PRSS35Q8N3Z0 413 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 Q8N9G6 341 aaPredicted RBP5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 NR1H4Q96RI1 486 aaPredicted RBP5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF416Q9BWM5 594 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 YIPF2Q9BWQ6 316 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 LHPPQ9H008 270 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF696Q9H7X3 374 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 SP140LQ9H930 580 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 EFCAB1Q9HAE3 211 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 FOLH1BQ9HBA9 442 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 GHRLQ9UBU3 117 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 SERTAD3Q9UJW9 196 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 RPS6KA6Q9UK32 745 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 V9GYQ6 96 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 JMJD1CQ15652 2540 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 COL6A5A8TX70 2615 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 KCNJ13O60928 360 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 ERAL1O75616 437 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 IL6P05231 212 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 CYP4B1P13584 511 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 CASP3P42574 277 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 CCR8P51685 355 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 RFX4Q33E94 735 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 SPATS1Q496A3 300 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 SHQ1Q6PI26 577 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 PLEKHM3Q6ZWE6 761 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 TMPRSS7Q7RTY8 843 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 TSTD1Q8NFU3 115 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 OR1N1Q8NGS0 311 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 PYURFQ96I23 114 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 LRFN5Q96NI6 719 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 EDARQ9UNE0 448 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 KCNK7Q9Y2U2 307 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 A8MU76 341 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 SURF4O15260 269 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 NKX2-8O15522 239 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 LANCL1O43813 399 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 LCKP06239 509 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 CCND1P24385 295 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 PSPHP78330 225 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 QRFPP83859 136 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 PLCL1Q15111 1095 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 MZT2AQ6P582 158 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 PEG10Q86TG7 708 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 RBMXL3Q8N7X1 1067 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 RERGQ96A58 199 aaPredicted RBP5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 UCN2Q96RP3 112 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 EFCAB11Q9BUY7 163 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 POLR1BQ9H9Y6 1135 aa5.03□□□□□ -1.6
TOPBP1-201ENST00000260810 PHPT1Q9NRX4 125 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms