RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ELOA3DA6NLF2 546 aaPredicted RBP14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 NPIPA5E9PKD4 350 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 GNGT2O14610 69 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 LDLRP01130 860 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 CRYABP02511 175 aaKnown RBP14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 PNMTP11086 282 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 CXCR1P25024 350 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 LIMS1P48059 325 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 LSM11P83369 360 aaKnown RBP eCLIP14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 ELOA3BQ3SY89 546 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 FGD3Q5JSP0 725 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 FAM180AQ6UWF9 173 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 CISD2Q8N5K1 135 aaKnown RBP14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 ELOA3Q8NG57 546 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 OR4C15Q8NGM1 316 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 MPP4Q96JB8 637 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 ZNF426Q9BUY5 554 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 SEMA6AQ9H2E6 1030 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 ANKRD19PQ9H560 264 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 REEP1Q9H902 201 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 NPIPA1Q9UND3 350 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 ZNF337Q9Y3M9 751 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 SAMHD1Q9Y3Z3 626 aaKnown RBP14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 ZNF407Q9C0G0 2248 aa14.27□□□□□ -0.13
CCDC90B-201ENST00000260054 IGKV1D-42A0A075B6H8 117 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 TNFRSF11BO00300 401 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 SUSD5O60279 629 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 MGRN1O60291 552 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 IGHG3P01860 377 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 PEPDP12955 493 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 ELK4P28324 431 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 HMGA2P52926 109 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 LAPTM4AQ15012 233 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 SEC23BQ15437 767 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 EXOC3L2Q2M3D2 409 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 PRR30Q53SZ7 412 aaPredicted RBP14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 ZNF324BQ6AW86 544 aaPredicted RBP14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 PODNL1Q6PEZ8 512 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 TRILQ7L0X0 811 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 TMEM179BQ7Z7N9 219 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 P3H2Q8IVL5 708 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 PQLC1Q8N2U9 271 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 NEIL3Q8TAT5 605 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 RELTQ969Z4 430 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 SNRNP40Q96DI7 357 aaKnown RBP14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 TMEM185BQ9H7F4 350 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 A0A087WUU8 490 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 TRGV5A0A0B4J1U4 118 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 ZC3H12DA2A288 527 aaKnown RBP14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 H3BML4 177 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 BAG2O95816 211 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 OPN1LWP04000 364 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 ANPEPP15144 967 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 SHC1P29353 583 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 UGT2B15P54855 530 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 SMIM11AP58511 58 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 EGR4Q05215 589 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 SELENBP1Q13228 472 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 C3orf33Q6P1S2 294 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 TBPL2Q6SJ96 375 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 ATP6V1C2Q8NEY4 427 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 TMEM239Q8WW34 195 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 ACOT11Q8WXI4 607 aaPredicted RBP14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 ALPK1Q96QP1 1244 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 BARD1Q99728 777 aaKnown RBP14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 BDH2Q9BUT1 245 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 OR11A1Q9GZK7 315 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 LDAHQ9H6V9 325 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 DCLRE1BQ9H816 532 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 PLSCR2Q9NRY7 297 aa14.26□□□□□ -0.13
CCDC90B-201ENST00000260054 CHMP24386 653 aa14.25□□□□□ -0.13
CCDC90B-201ENST00000260054 STARP49675 285 aa14.25□□□□□ -0.13
CCDC90B-201ENST00000260054 DCST1Q5T197 706 aa14.25□□□□□ -0.13
CCDC90B-201ENST00000260054 HS3ST5Q8IZT8 346 aa14.25□□□□□ -0.13
CCDC90B-201ENST00000260054 CENPNQ96H22 339 aaPredicted RBP14.25□□□□□ -0.13
CCDC90B-201ENST00000260054 EPYCQ99645 322 aa14.25□□□□□ -0.13
CCDC90B-201ENST00000260054 MEPEQ9NQ76 525 aaPredicted RBP14.25□□□□□ -0.13
CCDC90B-201ENST00000260054 SERINC1Q9NRX5 453 aa14.25□□□□□ -0.13
CCDC90B-201ENST00000260054 SPRR3Q9UBC9 169 aa14.25□□□□□ -0.13
CCDC90B-201ENST00000260054 NKX1-2Q9UD57 310 aaPredicted RBP14.25□□□□□ -0.13
CCDC90B-201ENST00000260054 DNAJC13O75165 2243 aa14.25□□□□□ -0.13
CCDC90B-201ENST00000260054 SH3PXD2BA1X283 911 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 KPNA4O00629 521 aaPredicted RBP14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 ATXN7O15265 892 aaPredicted RBP14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 ZNF208O43345 1280 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 PIP5K1CO60331 668 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 HCN1O60741 890 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 NPIPB7O75200 414 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 E2F6O75461 281 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 BMP7P18075 431 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 FPR1P21462 350 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 DNAJA1P31689 397 aaKnown RBP14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 SFTPDP35247 375 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 RBM34P42696 430 aaKnown RBP14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 RAC1P63000 192 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 HSF1Q00613 529 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 C19orf57Q0VDD7 668 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 RIPK1Q13546 671 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 SYT14P1Q58G82 188 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms