RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 TSPAN11A1L157 253 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 KDM4EB2RXH2 506 aaPredicted RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 CLDN4O14493 209 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 XKRYO14609 159 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 ARPC5O15511 151 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 SLC25A12O75746 678 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 ADH1BP00325 375 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 TFP02787 698 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 CISD3P0C7P0 127 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 PTGS2P35354 604 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 FAUP35544 74 aaKnown RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 RPS27P42677 84 aaKnown RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 FNTBP49356 437 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 TNFRSF17Q02223 184 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 TMEM52BQ4KMG9 183 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 YIF1BQ5BJH7 314 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 Q5BKY6 102 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 ZNF511Q8NB15 262 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 PMEPA1Q969W9 287 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 TRIM43Q96BQ3 446 aaPredicted RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 SGTBQ96EQ0 304 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 DERL3Q96Q80 235 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 ZFYVE21Q9BQ24 234 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 ORAI3Q9BRQ5 295 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 MED18Q9BUE0 208 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 PITHD1Q9GZP4 211 aaPredicted RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 ARL6Q9H0F7 186 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 ENKD1Q9H0I2 346 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 AUNIPQ9H7T9 357 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 SYNDIG1Q9H7V2 258 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 NOX4Q9NPH5 578 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 MED17Q9NVC6 651 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 NUBP2Q9Y5Y2 271 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 SIRT4Q9Y6E7 314 aaPredicted RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 MAP1BP46821 2468 aaKnown RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 A0A0A6YYC8 382 aaPredicted RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 A0A0B4J293 547 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 A0A1W2PPV9 198 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 PRSS38A1L453 326 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 TRABD2BA6NFA1 517 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 H0YGG7 62 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 H7C1C5 153 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 I3L1I5 382 aaPredicted RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 PDCD5O14737 125 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 FGF17O60258 216 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 KRT33AO76009 404 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 KLHL18O94889 574 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 NDUFB2O95178 105 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 PROS1P07225 676 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 CA3P07451 260 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 OR8G3PP0DMU2 310 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 ENDOUP21128 410 aaKnown RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 RBMS1P29558 406 aaKnown RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 P2RX3P56373 397 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 GMFBP60983 142 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 ARF3P61204 181 aaPredicted RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 LCN6P62502 163 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 FUT5Q11128 374 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 GALEQ14376 348 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 RPL13AP3Q6NVV1 102 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 APOOLQ6UXV4 268 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 CREB3L2Q70SY1 520 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 ZNF627Q7L945 461 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 SLC35F2Q8IXU6 374 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 MFSD9Q8NBP5 474 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 OR9A4Q8NGU2 314 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 MOSPD2Q8NHP6 518 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 NXPE2Q96DL1 559 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 SEC22CQ9BRL7 303 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 GTPBP2Q9BX10 602 aaKnown RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 TRIM2Q9C040 744 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 OR8D2Q9GZM6 311 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 COMMD4Q9H0A8 199 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.39□□□□□ -1.71
USP44-201ENST00000258499 IL23AQ9NPF7 189 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 PNO1Q9NRX1 252 aaKnown RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 ACOXLQ9NUZ1 547 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 CLDND1Q9NY35 253 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 ACTR10Q9NZ32 417 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 LAMP5Q9UJQ1 280 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 SCN2AQ99250 2005 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 CABIN1Q9Y6J0 2220 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 IGKV1-8A0A0C4DH67 115 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 CIB4A0PJX0 185 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 ERVH48-1M5A8F1 160 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 SCO2O43819 266 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 SELENOFO60613 162 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 LILRB3O75022 631 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 TRIM3O75382 744 aaPredicted RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 OR7A10O76100 309 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 KLF8O95600 359 aaPredicted RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 TBX6O95947 436 aaPredicted RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 PLGP00747 810 aaPredicted RBP4.39□□□□□ -1.71
USP44-201ENST00000258499 F13BP05160 661 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 NID1P14543 1247 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 STARP49675 285 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 SIRPAP78324 504 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 SQSTM1Q13501 440 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 TRAM1Q15629 374 aa4.39□□□□□ -1.71
USP44-201ENST00000258499 ITPRIPL2Q3MIP1 535 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms