RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 IGHV1-45A0A0A0MS14 117 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 C2orf72A6NCS6 295 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 OR6C70A6NIJ9 312 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 ALG1L2C9J202 215 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 MASP2O00187 686 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 PPM1BO75688 479 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 MST1P26927 711 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 LCN1P31025 176 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 PCYT1AP49585 367 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 SNRPGP62308 76 aaKnown RBP17.26■□□□□ 0.35
TRIM47-201ENST00000254816 CRYZQ08257 329 aaKnown RBP17.26■□□□□ 0.35
TRIM47-201ENST00000254816 TRIP6Q15654 476 aaKnown RBP17.26■□□□□ 0.35
TRIM47-201ENST00000254816 SNAPC1Q16533 368 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 C3orf38Q5JPI3 329 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 HES3Q5TGS1 186 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 CDK20Q8IZL9 346 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 OR6Q1Q8NGQ2 317 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 OIT3Q8WWZ8 545 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 WDR12Q9GZL7 423 aaKnown RBP17.26■□□□□ 0.35
TRIM47-201ENST00000254816 EXOSC3Q9NQT5 275 aaKnown RBP17.26■□□□□ 0.35
TRIM47-201ENST00000254816 TBCCD1Q9NVR7 557 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 FOXJ2Q9P0K8 574 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 OSGIN1Q9UJX0 560 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 PADI1Q9ULC6 663 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 B3GNT3Q9Y2A9 372 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 CPAMD8Q8IZJ3 1885 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 TRAV27A0A087WT01 109 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 LOC100506127A0A0U1RQW1 187 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 PLD2O14939 933 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 FADS1O60427 444 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 ZFAND5O76080 213 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 CYC1P08574 325 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 TGM1P22735 817 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 FOLR3P41439 243 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 TOMM34Q15785 309 aaPredicted RBP17.26■□□□□ 0.35
TRIM47-201ENST00000254816 INAQ16352 499 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 WBP2NLQ6ICG8 309 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 C6orf15Q6UXA7 325 aaPredicted RBP17.26■□□□□ 0.35
TRIM47-201ENST00000254816 TMPRSS11FQ6ZWK6 438 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 ZNF554Q86TJ5 538 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 OR8J1Q8NGP2 316 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 ZNF563Q8TA94 476 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 OSTF1Q92882 214 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 LAT2Q9GZY6 243 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 OR52D1Q9H346 318 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 CDH10Q9Y6N8 788 aa17.26■□□□□ 0.35
TRIM47-201ENST00000254816 FREM2Q5SZK8 3169 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 A0A087WUJ7 227 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 LRRN3E7EW58 273 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 OR2J2O76002 312 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 COX6A1P12074 109 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 TCN2P20062 427 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 ITPKBP27987 946 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 RBM34P42696 430 aaKnown RBP17.25■□□□□ 0.35
TRIM47-201ENST00000254816 CTBP2P56545 445 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 TEKQ02763 1124 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 SLC46A3Q7Z3Q1 461 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 OR5L2Q8NGL0 311 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 OR51A7Q8NH64 312 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 WDR36Q8NI36 951 aaKnown RBP17.25■□□□□ 0.35
TRIM47-201ENST00000254816 FANK1Q8TC84 345 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 POLDIP3Q9BY77 421 aaKnown RBP17.25■□□□□ 0.35
TRIM47-201ENST00000254816 MYOTQ9UBF9 498 aa17.25■□□□□ 0.35
TRIM47-201ENST00000254816 A0A1W2PQD3 144 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 IFITM3Q01628 133 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 DOC2BQ14184 412 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 ARMCX4Q5H9R4 360 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 OR8K3Q8NH51 312 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 CT55Q8WUE5 264 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 DNAJA4Q8WW22 397 aaPredicted RBP17.24■□□□□ 0.35
TRIM47-201ENST00000254816 OR5M11Q96RB7 305 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 DEFB126Q9BYW3 111 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 OR51E2Q9H255 320 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 TMEM5Q9Y2B1 443 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 NUDT14O95848 222 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 DLGAP3O95886 979 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 IRF3Q14653 427 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 TBC1D25Q3MII6 688 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 OR5M10Q6IEU7 315 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 THSD4Q6ZMP0 1018 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 DEFB124Q8NES8 71 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 ELP5Q8TE02 316 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 S100ZQ8WXG8 99 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 ZPBPQ9BS86 351 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 DDA1Q9BW61 102 aa17.24■□□□□ 0.35
TRIM47-201ENST00000254816 CCDC187A0A096LP49 1063 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 BOLA2-SMG1P6H3BVE0 249 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 ADAM10O14672 748 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 WISP1O95388 367 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 SLC2A10O95528 541 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 DBTP11182 482 aaKnown RBP17.23■□□□□ 0.35
TRIM47-201ENST00000254816 EFNB1P98172 346 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 BICRALQ6AI39 1079 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 PIP4P1Q86T03 277 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 MCFD2Q8NI22 146 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 DUSP19Q8WTR2 217 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 LRR1Q96L50 414 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 ZNF700Q9H0M5 742 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 HHATLQ9HCP6 504 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 GALNT9Q9HCQ5 603 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms