RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 LIX1LQ8IVB5 337 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 CPA6Q8N4T0 437 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 HUS1BQ8NHY5 278 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 ARNTL2Q8WYA1 636 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 SGK3Q96BR1 496 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 RSPRY1Q96DX4 576 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 HHIPL1Q96JK4 782 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 SGCZQ96LD1 299 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 PITX2Q99697 317 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 SMOQ99835 787 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 C12orf10Q9HB07 376 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 CRLF2Q9HC73 371 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 SLC39A9Q9NUM3 307 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 KLRF1Q9NZS2 232 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 EMCNQ9ULC0 261 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 ADAMTS5Q9UNA0 930 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 CORINQ9Y5Q5 1042 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 ANKUB1A6NFN9 424 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 AKR7A2O43488 359 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 KDELR3O43731 214 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR2T1O43869 369 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 APODP05090 189 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 MGST1P10620 155 aaKnown RBP12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 CCNOP22674 350 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 PREPP48147 710 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 TAS2R46P59540 309 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 SLC10A2Q12908 348 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 LETMD1Q6P1Q0 360 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 MAMDC4Q6UXC1 1216 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 MEPCEQ7L2J0 689 aaKnown RBP12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 RCBTB1Q8NDN9 531 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 PRRC1Q96M27 445 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 PIGQQ9BRB3 760 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 HERPUD2Q9BSE4 406 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 DPH1Q9BZG8 443 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 SPACA1Q9HBV2 294 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 ELOVL2Q9NXB9 296 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 COL2A1P02458 1487 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 TRDV1A0A1B0GX56 115 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 STATHP02808 62 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 C5AR1P21730 350 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 TACR3P29371 465 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 GPR176Q14439 515 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 ARHGAP11BQ3KRB8 267 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 TMEM244Q5VVB8 128 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 DPPA4Q7L190 304 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 WDR77Q9BQA1 342 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 KATNB1Q9BVA0 655 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 C1QTNF2Q9BXJ5 285 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 PTGES2Q9H7Z7 377 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 MOB1AQ9H8S9 216 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 CREBZFQ9NS37 354 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 SEMA4GQ9NTN9 838 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 HHLA2Q9UM44 414 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 MTMR11A4FU01 709 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 UMAD1C9J7I0 102 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 TPOP07202 933 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 CCL5P13501 91 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 THBS3P49746 956 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 RDH10Q8IZV5 341 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 IL26Q9NPH9 171 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 PLSCR3Q9NRY6 295 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 NPFFR2Q9Y5X5 522 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 B4GALT2O60909 372 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 C6P13671 934 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 MRPL19P49406 292 aaKnown RBP12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 DAPP51397 102 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 SCAPQ12770 1279 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 ARHGAP19Q14CB8 494 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 TAF9Q16594 264 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 STEAP1BQ6NZ63 245 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 TEX261Q6UWH6 196 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 ZNF551Q7Z340 670 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 UEVLDQ8IX04 471 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 LRRC25Q8N386 305 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 HSD17B11Q8NBQ5 300 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR4F15Q8NGB8 312 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR5M3Q8NGP4 307 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR1J2Q8NGS2 313 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR5M11Q96RB7 305 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 ZNF286AQ9HBT8 521 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 U3KQ87 197 aa12.33□□□□□ -0.44
PCDHGA3-201ENST00000253812 SDK1Q7Z5N4 2213 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 ARGFXA6NJG6 315 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 SLC9B1P1A6NJY1 282 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 PIRO00625 290 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 ASGR2P07307 311 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 NQO2P16083 231 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 HNF1AP20823 631 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 LBX1P52954 281 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 BAMBIQ13145 260 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 SLC17A1Q14916 467 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 PGGHGQ32M88 737 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 TECPR1Q7Z6L1 1165 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 DYNC2LI1Q8TCX1 351 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 MIB2Q96AX9 1013 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 DKKL1Q9UK85 242 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 DIMT1Q9UNQ2 313 aaKnown RBP12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 PRRC2BQ5JSZ5 2229 aaKnown RBP12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 CCDC88AQ3V6T2 1871 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms