RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 NR4A3Q92570 626 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 GSDMCQ9BYG8 508 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 UBQLN3Q9H347 655 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 ZNF780BQ9Y6R6 833 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 COLEC10Q9Y6Z7 277 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 FCMRO60667 390 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 RGS11O94810 467 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 NDUFV2P19404 249 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 COL9A1P20849 921 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 NUP62P37198 522 aaPredicted RBP17.5■□□□□ 0.39
SNX4-201ENST00000251775 TGM3Q08188 693 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 C6orf132Q5T0Z8 1188 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 TMEM255BQ8WV15 326 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 OR1E3Q8WZA6 343 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 C10orf90Q96M02 699 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 AUNIPQ9H7T9 357 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 EMC3Q9P0I2 261 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 KLF15Q9UIH9 416 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 SLC13A4Q9UKG4 626 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 ZMIZ1Q9ULJ6 1067 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 CA5BQ9Y2D0 317 aa17.5■□□□□ 0.39
SNX4-201ENST00000251775 TRBV23OR9-2A0A075B6M9 112 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 ZNF888P0CJ79 500 aaPredicted RBP17.49■□□□□ 0.39
SNX4-201ENST00000251775 ATF1P18846 271 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 CD53P19397 219 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 CXCL2P19875 107 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 RAB3BP20337 219 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 TNFRSF4P43489 277 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 DYRK1AQ13627 763 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 FAM111BQ6SJ93 734 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 C3P1Q6ZMU1 363 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 MEPCEQ7L2J0 689 aaKnown RBP17.49■□□□□ 0.39
SNX4-201ENST00000251775 OR10H4Q8NGA5 316 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 OR11G2Q8NGC1 345 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 OR52H1Q8NGJ2 320 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 CCL4L1Q8NHW4 92 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 ELSPBP1Q96BH3 223 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 SLC35A4Q96G79 324 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 HCAR1Q9BXC0 346 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 CHIAQ9BZP6 476 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 ZNF275Q9NSD4 429 aaPredicted RBP17.49■□□□□ 0.39
SNX4-201ENST00000251775 HEBP2Q9Y5Z4 205 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 ALDOBP05062 364 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 PDX1P52945 283 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 MBOAT2Q6ZWT7 520 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 MTSS1LQ765P7 747 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 RD3Q7Z3Z2 195 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 OR13C5Q8NGS8 318 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 KISS1RQ969F8 398 aaPredicted RBP17.49■□□□□ 0.39
SNX4-201ENST00000251775 PGLYRP3Q96LB9 341 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 CXorf58Q96LI9 332 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 ORAI3Q9BRQ5 295 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 ACTRT3Q9BYD9 372 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 PBX4Q9BYU1 374 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 ZC4H2Q9NQZ6 224 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 SPATA2Q9UM82 520 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 NPFFR2Q9Y5X5 522 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 F5P12259 2224 aa17.49■□□□□ 0.39
SNX4-201ENST00000251775 H0Y8X5 98 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 GMDSO60547 372 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 REM1O75628 298 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 TGM6O95932 706 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 MT-ND5P03915 603 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 ZGLP1P0C6A0 271 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 NTSR1P30989 418 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 ACVR1BP36896 505 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 DHODHQ02127 395 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 ZNF273Q14593 569 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 TRAM1Q15629 374 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 RGS7BPQ6MZT1 257 aaPredicted RBP17.48■□□□□ 0.39
SNX4-201ENST00000251775 ENPP7Q6UWV6 458 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 RPTNQ6XPR3 784 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 GDF7Q7Z4P5 450 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 OR7G2Q8NG99 324 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 FBXW5Q969U6 566 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 MS4A7Q9GZW8 240 aaPredicted RBP17.48■□□□□ 0.39
SNX4-201ENST00000251775 NPDC1Q9NQX5 325 aaPredicted RBP17.48■□□□□ 0.39
SNX4-201ENST00000251775 CAMK2AQ9UQM7 478 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 PLSCR5A0PG75 271 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 EPOPA6NHQ4 379 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 GSTZ1O43708 216 aaPredicted RBP17.48■□□□□ 0.39
SNX4-201ENST00000251775 TFP02787 698 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 IFNA16P05015 189 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 GDNFP39905 211 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 ACSM3Q53FZ2 586 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 SFRP4Q6FHJ7 346 aaPredicted RBP17.48■□□□□ 0.39
SNX4-201ENST00000251775 SYT9Q86SS6 491 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 SLITRK4Q8IW52 837 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 SLC16A11Q8NCK7 471 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 GAL3ST3Q96A11 431 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 ELMOD3Q96FG2 381 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 MRPL15Q9P015 296 aaKnown RBP17.48■□□□□ 0.39
SNX4-201ENST00000251775 PIPOXQ9P0Z9 390 aa17.48■□□□□ 0.39
SNX4-201ENST00000251775 A0A1W2PQF6 199 aa17.47■□□□□ 0.39
SNX4-201ENST00000251775 DNAJB6O75190 326 aa17.47■□□□□ 0.39
SNX4-201ENST00000251775 LAMP2P13473 410 aa17.47■□□□□ 0.39
SNX4-201ENST00000251775 VEGFCP49767 419 aa17.47■□□□□ 0.39
SNX4-201ENST00000251775 TMEM255AQ5JRV8 349 aa17.47■□□□□ 0.39
SNX4-201ENST00000251775 FBXO42Q6P3S6 717 aa17.47■□□□□ 0.39
SNX4-201ENST00000251775 TFAP2EQ6VUC0 442 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms