RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 NEUROG1Q92886 237 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 ZG16BQ96DA0 208 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 SLC35A5Q9BS91 424 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 EXOSC3Q9NQT5 275 aaKnown RBP18.62■□□□□ 0.57
NEDD8-201ENST00000250495 BTNL2Q9UIR0 455 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 E9PBE3 544 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 GPR171O14626 319 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 PMS2P2O95744 297 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 COX5AP20674 150 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 BGNP21810 368 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 EDNRAP25101 427 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 HTR3AP46098 478 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 TXNL4AP83876 142 aaKnown RBP18.61■□□□□ 0.57
NEDD8-201ENST00000250495 CHRNEQ04844 493 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 FAM174BQ3ZCQ3 159 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 FBXW9Q5XUX1 488 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 ABLIM2Q6H8Q1 611 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.61■□□□□ 0.57
NEDD8-201ENST00000250495 ATG4DQ86TL0 474 aaPredicted RBP18.61■□□□□ 0.57
NEDD8-201ENST00000250495 UBE2J2Q8N2K1 259 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 TRIML2Q8N7C3 387 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 KBTBD8Q8NFY9 601 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 PIGXQ8TBF5 258 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 CCDC115Q96NT0 180 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 TRIM2Q9C040 744 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 CENPHQ9H3R5 247 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 ALG2Q9H553 416 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 MEAF6Q9HAF1 191 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 KCNK9Q9NPC2 374 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 FAIMQ9NVQ4 179 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 CISD1Q9NZ45 108 aaKnown RBP18.61■□□□□ 0.57
NEDD8-201ENST00000250495 LIPT1Q9Y234 373 aa18.61■□□□□ 0.57
NEDD8-201ENST00000250495 NOSIPQ9Y314 301 aaKnown RBP18.61■□□□□ 0.57
NEDD8-201ENST00000250495 MAGED1Q9Y5V3 778 aaPredicted RBP18.61■□□□□ 0.57
NEDD8-201ENST00000250495 INAFM1C9JVW0 142 aa18.6■□□□□ 0.57
NEDD8-201ENST00000250495 ANXA11P50995 505 aaKnown RBP18.6■□□□□ 0.57
NEDD8-201ENST00000250495 FUT5Q11128 374 aa18.6■□□□□ 0.57
NEDD8-201ENST00000250495 VEZF1Q14119 521 aa18.6■□□□□ 0.57
NEDD8-201ENST00000250495 OGFOD2Q6N063 350 aa18.6■□□□□ 0.57
NEDD8-201ENST00000250495 ADGRG3Q86Y34 549 aa18.6■□□□□ 0.57
NEDD8-201ENST00000250495 ZNF433Q8N7K0 673 aaPredicted RBP18.6■□□□□ 0.57
NEDD8-201ENST00000250495 APH1AQ96BI3 265 aa18.6■□□□□ 0.57
NEDD8-201ENST00000250495 RADILQ96JH8 1075 aa18.6■□□□□ 0.57
NEDD8-201ENST00000250495 TRNT1Q96Q11 434 aaKnown RBP18.6■□□□□ 0.57
NEDD8-201ENST00000250495 GRIP2Q9C0E4 1043 aa18.6■□□□□ 0.57
NEDD8-201ENST00000250495 PNPOQ9NVS9 261 aa18.6■□□□□ 0.57
NEDD8-201ENST00000250495 TRAPPC4Q9Y296 219 aa18.6■□□□□ 0.57
NEDD8-201ENST00000250495 CIB4A0PJX0 185 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 OR5H1A6NKK0 313 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 ZNF716A6NP11 495 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 HMGN4O00479 90 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 BCAS1O75363 584 aaPredicted RBP18.59■□□□□ 0.57
NEDD8-201ENST00000250495 CDKN1AP38936 164 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 IDH2P48735 452 aaKnown RBP18.59■□□□□ 0.57
NEDD8-201ENST00000250495 LRRC74AQ0VAA2 488 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 PGGHGQ32M88 737 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 RNF130Q86XS8 419 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 CMIPQ8IY22 773 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 PMM1Q92871 262 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 ARL5BQ96KC2 179 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 PANX1Q96RD7 426 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 TMEM181Q9P2C4 612 aa18.59■□□□□ 0.57
NEDD8-201ENST00000250495 PRAMEF27A3QJZ7 478 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 CCDC154A6NI56 674 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 RAMP1O60894 148 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 MRPL33O75394 65 aaKnown RBP18.58■□□□□ 0.56
NEDD8-201ENST00000250495 MAGEA8P43361 318 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 SLC16A1P53985 500 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 OR2B6P58173 313 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 UFM1P61960 85 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 FAPQ12884 760 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 MPP2Q14168 576 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 GNA13Q14344 377 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 LRRC74BQ6ZQY2 392 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 SPATA19Q7Z5L4 167 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 CROCCP2Q86T23 111 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 PRIMA1Q86XR5 153 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 PAIP2Q9BPZ3 127 aaKnown RBP18.58■□□□□ 0.56
NEDD8-201ENST00000250495 TRAF4Q9BUZ4 470 aaPredicted RBP18.58■□□□□ 0.56
NEDD8-201ENST00000250495 REG4Q9BYZ8 158 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 SLCO5A1Q9H2Y9 848 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 MTHFD2LQ9H903 347 aaPredicted RBP18.58■□□□□ 0.56
NEDD8-201ENST00000250495 ASB6Q9NWX5 421 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 MGAT4BQ9UQ53 548 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 ZANQ9Y493 2812 aa18.58■□□□□ 0.56
NEDD8-201ENST00000250495 CCT8L1PA6NM43 557 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 CLDN24A6NM45 220 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 SHISA9B4DS77 424 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 RNF223E7ERA6 249 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 ABCD4O14678 606 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 EIF1BO60739 113 aaKnown RBP18.57■□□□□ 0.56
NEDD8-201ENST00000250495 IGHV3-9P01782 118 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 CCNA2P20248 432 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 MAP2K6P52564 334 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 NME5P56597 212 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 SLC35A1P78382 337 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 BST1Q10588 318 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 SYPL1Q16563 259 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 TNFAIP8L3Q5GJ75 292 aa18.57■□□□□ 0.56
NEDD8-201ENST00000250495 CEP85LQ5SZL2 805 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms