RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 A0A1W2PQ72 361 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CTNSO60931 367 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 AK1P00568 194 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CSTAP01040 98 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CSF2P04141 144 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CT45A8P0DMV1 189 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CT45A9P0DMV2 189 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CDC20Q12834 499 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 PYDC2Q56P42 97 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CT45A2Q5DJT8 189 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 VASNQ6EMK4 673 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 PRR22Q8IZ63 422 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 LNX2Q8N448 690 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 C7orf57Q8NEG2 295 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 TOR1AIP2Q8NFQ8 470 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 OR6F1Q8NGZ6 308 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 HSPA12BQ96MM6 686 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 Q9N2J8 555 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 MED17Q9NVC6 651 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 GRIP1Q9Y3R0 1128 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CLDN16Q9Y5I7 305 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 TNRC18O15417 2968 aaPredicted RBP14.5□□□□□ -0.09
LRFN1-201ENST00000248668 MUC3AQ02505 3323 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 RIIAD1A6NNX1 92 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CENPXA8MT69 81 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 J3QLW9 94 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 IGLV3-19P01714 112 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 IL7P13232 177 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 ZNF19P17023 458 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 ACVR1BP36896 505 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 Q5BKY6 102 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 FAM98AQ8NCA5 519 aaKnown RBP14.5□□□□□ -0.09
LRFN1-201ENST00000248668 OR52E2Q8NGJ4 325 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 ZMYND19Q96E35 227 aaPredicted RBP14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CCDC120Q96HB5 630 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 TEAD3Q99594 435 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 GPR27Q9NS67 375 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 EXOGQ9Y2C4 368 aaKnown RBP14.5□□□□□ -0.09
LRFN1-201ENST00000248668 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 A0A1W2PPK0 400 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CDC14CA4D256 554 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CHURC1-FNTBB4DL54 471 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 CHP2O43745 196 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 HPGDSO60760 199 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 PTTG1O95997 202 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 IGHA1P01876 353 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 ETV6P41212 452 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 NAA10P41227 235 aaPredicted RBP14.5□□□□□ -0.09
LRFN1-201ENST00000248668 FNTBP49356 437 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 DDI2Q5TDH0 399 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 RNF113BQ8IZP6 322 aaKnown RBP14.5□□□□□ -0.09
LRFN1-201ENST00000248668 ESX1Q8N693 406 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 KISS1RQ969F8 398 aaPredicted RBP14.5□□□□□ -0.09
LRFN1-201ENST00000248668 OR8D2Q9GZM6 311 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 STMN3Q9NZ72 180 aa14.5□□□□□ -0.09
LRFN1-201ENST00000248668 A0A1B0GVC2 190 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 A6NIN4 97 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 C17orf51A8MQB3 221 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 SRFP11831 508 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 OR2B6P58173 313 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 E2F1Q01094 437 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 IL20RBQ6UXL0 311 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 GID4Q8IVV7 300 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 BCORP1Q8N888 145 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 TSLPQ969D9 159 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 TCTN2Q96GX1 697 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 NRSN2Q9GZP1 204 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 SRRQ9GZT4 340 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 RPRD1BQ9NQG5 326 aaKnown RBP14.49□□□□□ -0.09
LRFN1-201ENST00000248668 PRDM9Q9NQV7 894 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 CMC2Q9NRP2 79 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 IQCMA0A1B0GVH7 501 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 C4orf47A7E2U8 309 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 HCN1O60741 890 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 NME1P15531 152 aaKnown RBP14.49□□□□□ -0.09
LRFN1-201ENST00000248668 ENPP1P22413 925 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 APEX1P27695 318 aaKnown RBP14.49□□□□□ -0.09
LRFN1-201ENST00000248668 RPL4P36578 427 aaKnown RBP14.49□□□□□ -0.09
LRFN1-201ENST00000248668 TDGQ13569 410 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 CDK10Q15131 360 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.49□□□□□ -0.09
LRFN1-201ENST00000248668 ZNF613Q6PF04 617 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 TMPRSS11FQ6ZWK6 438 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 OR5M3Q8NGP4 307 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 GAL3ST4Q96RP7 486 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 MMP28Q9H239 520 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 MCCC2Q9HCC0 563 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 KLHL1Q9NR64 748 aa14.49□□□□□ -0.09
LRFN1-201ENST00000248668 FAM171A2A8MVW0 826 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 C17orf105B2RV13 164 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 C10orf142B7Z368 130 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 SRPX2O60687 465 aaPredicted RBP14.48□□□□□ -0.09
LRFN1-201ENST00000248668 HLA-DPB1P04440 258 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 CD1CP29017 333 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 GPR3P46089 330 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 OR12D2P58182 307 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 AGAP6Q5VW22 663 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 POMZP3Q6PJE2 187 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 LYPD4Q6UWN0 246 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 SSX6Q7RTT6 188 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms