RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 NR5A2O00482 541 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 TGDSO95455 350 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 NUDT7P0C024 238 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 TACR3P29371 465 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 OR3A2P47893 321 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 POLR2HP52434 150 aaKnown RBP12.62□□□□□ -0.39
GPN3-201ENST00000228827 CRISP3P54108 245 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 ADAM8P78325 824 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 EPS8Q12929 822 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 ACKR1Q16570 336 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 LIN52Q52LA3 116 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 SFRP5Q5T4F7 317 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 ABLIM2Q6H8Q1 611 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 HDXQ7Z353 690 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 GALNT5Q7Z7M9 940 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 MTDHQ86UE4 582 aaKnown RBP12.62□□□□□ -0.39
GPN3-201ENST00000228827 ZNF100Q8IYN0 542 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 WFDC11Q8NEX6 87 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 SLC38A5Q8WUX1 472 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 ZHX1-C8orf76Q96EF9 292 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 THOC1Q96FV9 657 aaKnown RBP12.62□□□□□ -0.39
GPN3-201ENST00000228827 PLPPR2Q96GM1 343 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 INTS9Q9NV88 658 aaKnown RBP12.62□□□□□ -0.39
GPN3-201ENST00000228827 BEX4Q9NWD9 120 aaPredicted RBP12.62□□□□□ -0.39
GPN3-201ENST00000228827 CALML5Q9NZT1 146 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 OSGIN1Q9UJX0 560 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 ZNF443Q9Y2A4 671 aaPredicted RBP12.62□□□□□ -0.39
GPN3-201ENST00000228827 TMEM247A6NEH6 219 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 RAMP1O60894 148 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 LYZL6O75951 148 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 PMS2P2O95744 297 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 PLAUP00749 431 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 TFPTP0C1Z6 253 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 SLC1A3P43003 542 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 MAGEA8P43361 318 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 HTR3AP46098 478 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 RGNQ15493 299 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 CCDC103Q8IW40 242 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 KISS1RQ969F8 398 aaPredicted RBP12.61□□□□□ -0.39
GPN3-201ENST00000228827 MAL2Q969L2 176 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 DDIT4LQ96D03 193 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 CCL19Q99731 98 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 CCDC28BQ9BUN5 200 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 HDHD5Q9BXW7 423 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 OR10A4Q9H209 315 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 CCDC167Q9P0B6 97 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 HDGFL3Q9Y3E1 203 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 DSPPQ9NZW4 1301 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 F8P00451 2351 aa12.61□□□□□ -0.39
GPN3-201ENST00000228827 NUP214P35658 2090 aaPredicted RBP12.6□□□□□ -0.39
GPN3-201ENST00000228827 ZNF724A8MTY0 619 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 HMGB1P1B2RPK0 211 aaPredicted RBP12.6□□□□□ -0.39
GPN3-201ENST00000228827 CLIC1O00299 241 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 IGHV3-9P01782 118 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 UQCRBP14927 111 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 FPR1P21462 350 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 NKX6-1P78426 367 aaPredicted RBP12.6□□□□□ -0.39
GPN3-201ENST00000228827 CAPRIN1Q14444 709 aaKnown RBP12.6□□□□□ -0.39
GPN3-201ENST00000228827 ZNF704Q6ZNC4 412 aaPredicted RBP12.6□□□□□ -0.39
GPN3-201ENST00000228827 Q6ZT83 130 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 BHLHA15Q7RTS1 189 aaPredicted RBP12.6□□□□□ -0.39
GPN3-201ENST00000228827 FUNDC1Q8IVP5 155 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 ZNF440Q8IYI8 595 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 CLIP4Q8N3C7 705 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 CADM2Q8N3J6 435 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 PMM1Q92871 262 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 SPDL1Q96EA4 605 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 CACYBPQ9HB71 228 aaKnown RBP12.6□□□□□ -0.39
GPN3-201ENST00000228827 ARGLU1Q9NWB6 273 aaPredicted RBP12.6□□□□□ -0.39
GPN3-201ENST00000228827 THUMPD1Q9NXG2 353 aaKnown RBP12.6□□□□□ -0.39
GPN3-201ENST00000228827 EMC3Q9P0I2 261 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 SLAMF8Q9P0V8 285 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 TMEM181Q9P2C4 612 aa12.6□□□□□ -0.39
GPN3-201ENST00000228827 NOSIPQ9Y314 301 aaKnown RBP12.6□□□□□ -0.39
GPN3-201ENST00000228827 A0A096LPI6 279 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 A0A0G2JPF8 293 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 ZC3H12DA2A288 527 aaKnown RBP12.59□□□□□ -0.39
GPN3-201ENST00000228827 CDHR4A6H8M9 788 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 ZNF716A6NP11 495 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 HNRNPCL2B2RXH8 293 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 HNRNPCL3B7ZW38 293 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 FAAHO00519 579 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 HNRNPCL1O60812 293 aaKnown RBP12.59□□□□□ -0.39
GPN3-201ENST00000228827 SMPD2O60906 423 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 HNRNPCL4P0DMR1 293 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 IMPDH2P12268 514 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 PRG2P13727 222 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 HOXB9P17482 250 aaPredicted RBP12.59□□□□□ -0.39
GPN3-201ENST00000228827 NCF2P19878 526 aaPredicted RBP12.59□□□□□ -0.39
GPN3-201ENST00000228827 CXCR1P25024 350 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 FKBP2P26885 142 aaKnown RBP12.59□□□□□ -0.39
GPN3-201ENST00000228827 MRPL19P49406 292 aaKnown RBP12.59□□□□□ -0.39
GPN3-201ENST00000228827 CLK1P49759 484 aaKnown RBP12.59□□□□□ -0.39
GPN3-201ENST00000228827 NR1H2P55055 460 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 ITGADQ13349 1161 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 LARS2Q15031 903 aaKnown RBP12.59□□□□□ -0.39
GPN3-201ENST00000228827 P2RY6Q15077 328 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 TAB1Q15750 504 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 STK11Q15831 433 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 AGKQ53H12 422 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms