RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 H3BML4 177 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 RNF13O43567 381 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 CFL1P23528 166 aaKnown RBP8.74□□□□□ -1.01
CCDC113-201ENST00000219299 PCGF2P35227 344 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 SFTPDP35247 375 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 CRISP1P54107 249 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 FGFBP1Q14512 234 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 PRAMEF20Q5VT98 475 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 NLGN4YQ8NFZ3 816 aaPredicted RBP8.74□□□□□ -1.01
CCDC113-201ENST00000219299 NDNFQ8TB73 568 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 ADAD1Q96M93 576 aaKnown RBP8.74□□□□□ -1.01
CCDC113-201ENST00000219299 NANSQ9NR45 359 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 THSD1Q9NS62 852 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 SEMA4GQ9NTN9 838 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 ANKRD10Q9NXR5 420 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 NUFIP1Q9UHK0 495 aaKnown RBP8.74□□□□□ -1.01
CCDC113-201ENST00000219299 PLEKHA6Q9Y2H5 1048 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 G3V3Y1 287 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 RBBP9O75884 186 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 SYNGR4O95473 234 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 MT-CO3P00414 261 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 FOLR1P15328 257 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 BSGP35613 385 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 CASP6P55212 293 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 FOXC1Q12948 553 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 RUNX2Q13950 521 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 ZNF619Q8N2I2 560 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 FTMTQ8N4E7 242 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 POGLUT1Q8NBL1 392 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 OR4C15Q8NGM1 316 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 ZFP90Q8TF47 636 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 BTBD2Q9BX70 525 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 PCDHB16Q9NRJ7 776 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 QPCTLQ9NXS2 382 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 ASB4Q9Y574 426 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 PCDHGB2Q9Y5G2 931 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 NOX1Q9Y5S8 564 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 FNDC1Q4ZHG4 1894 aaPredicted RBP8.74□□□□□ -1.01
CCDC113-201ENST00000219299 LYRM1O43325 122 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 OPN1LWP04000 364 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 FUCA1P04066 466 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 WNT1P04628 370 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 TFAP2AP05549 437 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 RETP07949 1114 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 GM2AP17900 193 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 KCNJ10P78508 379 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 ATXN7L3Q14CW9 347 aaPredicted RBP8.74□□□□□ -1.01
CCDC113-201ENST00000219299 AGERQ15109 404 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 PIWIL3Q7Z3Z3 882 aaKnown RBP8.74□□□□□ -1.01
CCDC113-201ENST00000219299 FAM109AQ8N4B1 249 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 TMEM151AQ8N4L1 468 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 YIPF7Q8N8F6 280 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 OR4K5Q8NGD3 323 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 SLC38A5Q8WUX1 472 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 FEVQ99581 238 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 PPA2Q9H2U2 334 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 RGCCQ9H4X1 137 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 UBQLN4Q9NRR5 601 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 ABCD2Q9UBJ2 740 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 RIMS3Q9UJD0 308 aa8.74□□□□□ -1.01
CCDC113-201ENST00000219299 ZNF20P17024 532 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 SLC6A6P31641 620 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 LRIF1Q5T3J3 769 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 GALNT11Q8NCW6 608 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 SFXN5Q8TD22 340 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 MVB12AQ96EY5 273 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 LRRTM2O43300 516 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 ATE1O95260 518 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 ZNF28P17035 718 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 GPR4P46093 362 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 SRYQ05066 204 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 COL28A1Q2UY09 1125 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 COX20Q5RI15 118 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 KCTD9Q7L273 389 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 VRK2Q86Y07 508 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 SPARTQ8N0X7 666 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 OR7G1Q8NGA0 311 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 OR6Q1Q8NGQ2 317 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 SNAPC3Q92966 411 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 COQ8BQ96D53 544 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 CCDC120Q96HB5 630 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 ZNF583Q96ND8 569 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 CPPED1Q9BRF8 314 aaPredicted RBP8.73□□□□□ -1.01
CCDC113-201ENST00000219299 TWSG1Q9GZX9 223 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 CENPMQ9NSP4 180 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 TMEM74BQ9NUR3 256 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 HEMK1Q9Y5R4 338 aaPredicted RBP8.73□□□□□ -1.01
CCDC113-201ENST00000219299 PI4KAP42356 2102 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 C1orf196B1AJZ1 125 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 ZNF195O14628 629 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 PRKNO60260 465 aaPredicted RBP8.73□□□□□ -1.01
CCDC113-201ENST00000219299 PPM1BO75688 479 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 SP9P0CG40 484 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 DLSTP36957 453 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 GPR143P51810 404 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 CDK5R2Q13319 367 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 MAD2L1BPQ15013 274 aaPredicted RBP8.73□□□□□ -1.01
CCDC113-201ENST00000219299 ELAVL1Q15717 326 aaKnown RBP8.73□□□□□ -1.01
CCDC113-201ENST00000219299 SLC22A10Q63ZE4 541 aa8.73□□□□□ -1.01
CCDC113-201ENST00000219299 FCRLBQ6BAA4 426 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms