RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 STX4Q12846 297 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 TMEM35AQ53FP2 167 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 DMRTC1Q5HYR2 192 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 AVL9Q8NBF6 648 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 SETD6Q8TBK2 473 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 WDR89Q96FK6 387 aaPredicted RBP13.93□□□□□ -0.18
EFNB1-201ENST00000204961 HSPA12BQ96MM6 686 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 MS4A4EQ96PG1 132 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 BCL2L10Q9HD36 194 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 ASB6Q9NWX5 421 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 LRIT1Q9P2V4 623 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 SLC6A5Q9Y345 797 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 ZNF106Q9H2Y7 1883 aaKnown RBP13.93□□□□□ -0.18
EFNB1-201ENST00000204961 COL4A3Q01955 1670 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 TEX13CA0A0J9YWL9 993 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 NGFRP08138 427 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 ATF1P18846 271 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 FRKP42685 505 aaPredicted RBP13.93□□□□□ -0.18
EFNB1-201ENST00000204961 ADPRHP54922 357 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 PIAS4Q8N2W9 510 aaPredicted RBP13.93□□□□□ -0.18
EFNB1-201ENST00000204961 LINC00471Q8N535 108 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 LRRC20Q8TCA0 184 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 RSC1A1Q92681 617 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 MSANTD3Q96H12 275 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 FAM60AQ9NP50 221 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 FGF20Q9NP95 211 aaPredicted RBP13.93□□□□□ -0.18
EFNB1-201ENST00000204961 POT1Q9NUX5 634 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 LOC105371267A0A1B0GV96 52 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 KDM4EB2RXH2 506 aaPredicted RBP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 MAS1P04201 325 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 HMGN1P05114 100 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 PROS1P07225 676 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 ANKRD34CP0C6C1 535 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 ATF4P18848 351 aaPredicted RBP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 MAOAP21397 527 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 FPR3P25089 353 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 STAT5AP42229 794 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 AP2S1P53680 142 aaPredicted RBP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 HTRA4P83105 476 aaPredicted RBP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 YOD1Q5VVQ6 348 aaPredicted RBP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 FAAH2Q6GMR7 532 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 CHMP1BQ7LBR1 199 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 CEP76Q8TAP6 659 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 THAP4Q8WY91 577 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 PRSS27Q9BQR3 290 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 DAPP1Q9UN19 280 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 SLCO1B1Q9Y6L6 691 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 DUXAA6NLW8 204 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 MCIDASD6RGH6 385 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 C11orf98E9PRG8 122 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 TSPAN4O14817 238 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 FGF19O95750 216 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 MT-ND5P03915 603 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 HSD17B2P37059 387 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 RRAS2P62070 204 aaPredicted RBP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 MAB21L1Q13394 359 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 ZNF776Q68DI1 518 aaPredicted RBP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 MRM1Q6IN84 353 aaKnown RBP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 SHISA6Q6ZSJ9 500 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 SRFBP1Q8NEF9 429 aaKnown RBP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 TTLQ8NG68 377 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 AKAP1Q92667 903 aaKnown RBP eCLIP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 RBM18Q96H35 190 aaKnown RBP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 GAL3ST4Q96RP7 486 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 C1QTNF2Q9BXJ5 285 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 HDAC8Q9BY41 377 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 EVA1BQ9NVM1 165 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 KLK11Q9UBX7 282 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 LOC100509620A0A075B734 347 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 HNRNPA1P09651 372 aaKnown RBP eCLIP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 PITPNBP48739 271 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 ZIC1Q15915 447 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 OR5M10Q6IEU7 315 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 SLC25A25Q6KCM7 469 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 PMEPA1Q969W9 287 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 ACTR10Q9NZ32 417 aa13.92□□□□□ -0.18
EFNB1-201ENST00000204961 ATXN7L1Q9ULK2 861 aaPredicted RBP13.92□□□□□ -0.18
EFNB1-201ENST00000204961 SIX6O95475 246 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 HLA-DQA2P01906 255 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 OR8G3PP0DMU2 310 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 RAB3BP20337 219 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 TNFRSF17Q02223 184 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 ARIH2OSQ8N7S6 290 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 ZNF527Q8NB42 609 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 LGALS14Q8TCE9 139 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 ARHGDIGQ99819 225 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 FLRT3Q9NZU0 649 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 EGFP01133 1207 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 SBK2P0C263 348 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 ERP29P30040 261 aaKnown RBP13.91□□□□□ -0.18
EFNB1-201ENST00000204961 GZMKP49863 264 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 FZD5Q13467 585 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 CDH24Q86UP0 819 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 ZNF655Q8N720 491 aaPredicted RBP13.91□□□□□ -0.18
EFNB1-201ENST00000204961 POGLUT1Q8NBL1 392 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 MFSD9Q8NBP5 474 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 OR11H4Q8NGC9 324 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 OR4C3Q8NH37 302 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 ZFAND1Q8TCF1 268 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 DNAJA4Q8WW22 397 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms