RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 ABCB9Q9NP78 766 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 C14orf119Q9NWQ9 140 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 BABAM2Q9NXR7 383 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 HAO2Q9NYQ3 351 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 DHCR7Q9UBM7 475 aaKnown RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 COPS7AQ9UBW8 275 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 ADAM30Q9UKF2 790 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 V9GYH0 126 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 SMIM30A4D0T7 59 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 CD8B2A6NJW9 211 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 A8MUA0 341 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 GTPBP1O00178 669 aaKnown RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 LRRTM2O43300 516 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 CLPSP04118 112 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 GAAP10253 952 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 CD8BP10966 210 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 CD53P19397 219 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 SLC2A5P22732 501 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 F8A1P23610 371 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 IL12BP29460 328 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 GRK6P43250 576 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 CXCL12P48061 93 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ARRB1P49407 418 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 SLC37A1P57057 533 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 PRPS1P60891 318 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 DCAF7P61962 342 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ACTA2P62736 377 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ACTG2P63267 376 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 KLHL26Q53HC5 615 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 YOD1Q5VVQ6 348 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 DPY19L2P2Q6ZN68 376 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 KMT5CQ86Y97 462 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 SLC35F3Q8IY50 421 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ABCA7Q8IZY2 2146 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 CADM3Q8N126 398 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 D2HGDHQ8N465 521 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ARIH2OSQ8N7S6 290 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 Q8N9G6 341 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 FAM71CQ8NEG0 241 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 PTPMT1Q8WUK0 201 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 DNASE2BQ8WZ79 361 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 SMPDL3BQ92485 455 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 DAZLQ92904 295 aaKnown RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 TSLPQ969D9 159 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 KIAA1143Q96AT1 154 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 MRPL48Q96GC5 212 aaKnown RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 CNN2Q99439 309 aaKnown RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 PHOX2BQ99453 314 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 SLC7A5P2Q9GIP4 190 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ISG20L2Q9H9L3 353 aaKnown RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ADGRL4Q9HBW9 690 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF304Q9HCX3 659 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 EXOSC3Q9NQT5 275 aaKnown RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 PLEKHB1Q9UF11 243 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 CHRNA9Q9UGM1 479 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 SERTAD3Q9UJW9 196 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ICAM5Q9UMF0 924 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 IGKV3D-11A0A0A0MRZ8 115 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 A0A1B0GX78 115 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 FABP12A6NFH5 140 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF264O43296 627 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 OR7A10O76100 309 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 UTS2O95399 124 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 GYPBP06028 91 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 CLUP10909 449 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 HIST1H1CP16403 213 aaKnown RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 MYL9P24844 172 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 LCN1P31025 176 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ADH7P40394 386 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 SLC6A8P48029 635 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ARL9Q6T311 187 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 PRSS42Q7Z5A4 293 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 LSRQ86X29 649 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 C10orf53Q8N6V4 93 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 POMGNT2Q8NAT1 580 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 OR5M3Q8NGP4 307 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 OR4K13Q8NH42 304 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 OR5W2Q8NH69 310 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 OR1L3Q8NH93 324 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 OR14A16Q8NHC5 309 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF563Q8TA94 476 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 PTP4A1Q93096 173 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 C4orf36Q96KX1 117 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 LMF1Q96S06 567 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 SDHCQ99643 169 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 SRRQ9GZT4 340 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 NXF5Q9H1B4 397 aaKnown RBP7.58□□□□□ -1.2
VAMP3-201ENST00000054666 PRO3102Q9H379 93 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 PCDHGB7Q9Y5F8 929 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 IER3IP1Q9Y5U9 82 aa7.58□□□□□ -1.2
VAMP3-201ENST00000054666 NUP210LQ5VU65 1888 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.57□□□□□ -1.2
VAMP3-201ENST00000054666 C2orf92A0A1B0GVN3 265 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 A0A1B0GVT2 93 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 A8MU76 341 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 MCIDASD6RGH6 385 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 SNPHO15079 494 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 TMCC2O75069 709 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 IGF2P01344 180 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms