RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 MST1P26927 711 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 NRG3P56975 720 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 ITGADQ13349 1161 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 PAPD4Q6PIY7 484 aaKnown RBP13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 PAQR6Q6TCH4 344 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 DPY19L2P2Q6ZN68 376 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 CPEB2Q7Z5Q1 589 aaKnown RBP13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 MISPQ8IVT2 679 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 OR5W2Q8NH69 310 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 PTP4A1Q93096 173 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 GPX7Q96SL4 187 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 PHOX2BQ99453 314 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 LPAR4Q99677 370 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF649Q9BS31 505 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 TBL1XR1Q9BZK7 514 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 RTN4RQ9BZR6 473 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 SLIRPQ9GZT3 109 aaKnown RBP13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 SIAEQ9HAT2 523 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 RXFP3Q9NSD7 469 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 HAO2Q9NYQ3 351 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 PCDHGB6Q9Y5F9 930 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 PMF1-BGLAPU3KQ54 211 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 SLC22A31A6NKX4 558 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 PRR23D1E9PI22 279 aaPredicted RBP13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 SOCS6O14544 535 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 ADAM10O14672 748 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 KHNYNO15037 678 aaKnown RBP13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 IDH3BO43837 385 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 PPP1R3DO95685 299 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 PRR23D2P0DMB1 279 aaPredicted RBP13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF3P17036 446 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 BMXP51813 675 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 PRPS1P60891 318 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 ACSM1Q08AH1 577 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 TPBGQ13641 420 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 SLC35F1Q5T1Q4 408 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 DESI1Q6ICB0 168 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 LCN10Q6JVE6 187 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 PHC2Q8IXK0 858 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 TMCO5AQ8N6Q1 288 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 SLC37A3Q8NCC5 494 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 OR5L2Q8NGL0 311 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 OR9Q1Q8NGQ5 310 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 OR52N1Q8NH53 320 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 RNF138Q8WVD3 245 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 KISS1RQ969F8 398 aaPredicted RBP13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 BORCS5Q969J3 196 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 CRB3Q9BUF7 120 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 PALMDQ9NP74 551 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 INPP5EQ9NRR6 644 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 CCDC59Q9P031 241 aaKnown RBP13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 TNFRSF10DQ9UBN6 386 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 KLHL21Q9UJP4 597 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 NPFFR2Q9Y5X5 522 aa13.07□□□□□ -0.32
RTFDC1-201ENST00000023939 CCDC182A6NF36 153 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 B4E171 279 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 DLL1O00548 723 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 FLRT2O43155 660 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 HCRTR2O43614 444 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 CDC40O60508 579 aaKnown RBP eCLIP13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 FOXD2O60548 495 aaPredicted RBP13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 APEHP13798 732 aaKnown RBP13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 PGCP20142 388 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 SLC2A5P22732 501 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 PSMA1P25786 263 aaKnown RBP13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 CCKBRP32239 447 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 EVI2BP34910 448 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 TSPAN7P41732 249 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 CCR4P51679 360 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 FOXL2P58012 376 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 SLC26A5P58743 744 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 ANGPT1Q15389 498 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF74Q16587 644 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 ADCK1Q86TW2 530 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 MARCH3Q86UD3 253 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 DTNBP1Q96EV8 351 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 CHCHD6Q9BRQ6 235 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 ARHGAP9Q9BRR9 750 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 CENPOQ9BU64 300 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 NXF2Q9GZY0 626 aaKnown RBP13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 ZBTB20Q9HC78 741 aaPredicted RBP13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 NRIP3Q9NQ35 241 aa13.06□□□□□ -0.32
RTFDC1-201ENST00000023939 ZDBF2Q9HCK1 2354 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 HEATR5AQ86XA9 2040 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 LOC102723996A0A087X1L8 192 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 FAM183AA6NL82 134 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 GNB5O14775 395 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 GPX5O75715 221 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 PAICSP22234 425 aaKnown RBP13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 TACR3P29371 465 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 SOX3P41225 446 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 P2RX1P51575 399 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 EGR4Q05215 589 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 CRMP1Q14194 572 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 LPAL2Q16609 132 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 PLA2G2CQ5R387 149 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF517Q6ZMY9 492 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 AMER2Q8N7J2 671 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 OR4F15Q8NGB8 312 aa13.05□□□□□ -0.32
RTFDC1-201ENST00000023939 OR5M3Q8NGP4 307 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms