RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 TMEM184BQ9Y519 407 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ABCA7Q8IZY2 2146 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 TMEM82A0PJX8 343 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 LINC01387J3KSC0 135 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 SLC16A6O15403 523 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 SLC31A1O15431 190 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 RNGTTO60942 597 aaKnown RBP5.71□□□□□ -1.49
VPS13D-201ENST00000011700 NSA2O95478 260 aaKnown RBP5.71□□□□□ -1.49
VPS13D-201ENST00000011700 TXNDC12O95881 172 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 PTAFRP25105 342 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 GIPRP48546 466 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 SLC10A1Q14973 349 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 AVPI1Q5T686 147 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 OR4F3Q6IEY1 312 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 FAM180BQ6P0A1 224 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 OR2A12Q8NGT7 310 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 MR1Q95460 341 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 ENKD1Q9H0I2 346 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 IGFLR1Q9H665 355 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 RIPK3Q9Y572 518 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 TSC2P49815 1807 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.71□□□□□ -1.49
VPS13D-201ENST00000011700 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.71□□□□□ -1.49
VPS13D-201ENST00000011700 CER1O95813 267 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 FNTBP49356 437 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 BPIFB3P59826 476 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 TAF9Q16594 264 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 ASRGL1Q7L266 308 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 CSNK1A1LQ8N752 337 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 OR11L1Q8NGX0 322 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 PTERQ96BW5 349 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 SLC12A9Q9BXP2 914 aa5.71□□□□□ -1.49
VPS13D-201ENST00000011700 SERPINA5P05154 406 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 CA5AP35218 305 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 AGFG1P52594 562 aaKnown RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 UFM1P61960 85 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 RPS13P62277 151 aaKnown RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 TBPL1P62380 186 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 OTOP2Q7RTS6 562 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 BORCS6Q96GS4 357 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 SIDT1Q9NXL6 827 aaKnown RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 RARRES3Q9UL19 164 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 CD1DP15813 335 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 PTGER4P35408 488 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF136P52737 540 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 HABP2Q14520 560 aaPredicted RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 SOWAHAQ2M3V2 549 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 GALNT10Q86SR1 603 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 GALNT11Q8NCW6 608 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 PXYLP1Q8TE99 480 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 CUL9Q8IWT3 2517 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 MEIOCA2RUB1 952 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 ANHXE9PGG2 379 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 MAGEB4O15481 346 aaPredicted RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 BANF1O75531 89 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 C6orf47O95873 294 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 INHAP05111 366 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 ITGB7P26010 798 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 MSX1P28360 303 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 CCR7P32248 378 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 ECHDC3Q96DC8 303 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 MMABQ96EY8 250 aaPredicted RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 INTS6Q9UL03 887 aaKnown RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 HS3ST4Q9Y661 456 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 PLXND1Q9Y4D7 1925 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 IGLV3-22A0A075B6J6 115 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 A0A0U1RQJ8 604 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 DVL2O14641 736 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 SCG5P05408 212 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 EDNRBP24530 442 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 ITGB8P26012 769 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 CTSOP43234 321 aaPredicted RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 CSNK1DP48730 415 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 BEX3Q00994 111 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 CAMK2BQ13554 666 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 CRMP1Q14194 572 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 MEP1BQ16820 701 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 ARSIQ5FYB1 569 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 LRFN4Q6PJG9 635 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 ZDHHC24Q6UX98 284 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 COX15Q7KZN9 410 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 OR5D16Q8NGK9 328 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 UBQLN4Q9NRR5 601 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 HRASLS2Q9NWW9 162 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 KPTNQ9Y664 436 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 ANKRD34BA5PLL1 514 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 GOSR2O14653 212 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 SGCEO43556 437 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 WNT11O96014 354 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 LAP3P28838 519 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 GABRA3P34903 492 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 AQP6Q13520 282 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 GPR19Q15760 415 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 FXNQ16595 210 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF691Q5VV52 312 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 H3F3CQ6NXT2 135 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 OR14L1PQ8NHC6 308 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 HUS1BQ8NHY5 278 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 PLK3Q9H4B4 646 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms