RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CCDC120Q96HB5 630 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 SLC6A7Q99884 636 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 RANBP3Q9H6Z4 567 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-223ENST00000640640 MEPEQ9NQ76 525 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-223ENST00000640640 MGAT4CQ9UBM8 478 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 NOX1Q9Y5S8 564 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 OR5K3A6NET4 321 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 TLCD2A6NGC4 264 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 HMGN4O00479 90 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 METAP1P53582 386 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 ACTBP60709 375 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 ACTG1P63261 375 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 LRRC37A5PQ49AS3 106 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 BCDIN3DQ7Z5W3 292 aaKnown RBP16.34■□□□□ 0.21
SCARB2-223ENST00000640640 ZNF565Q8N9K5 539 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 FAM46BQ96A09 425 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 A0A1B0GTW7 788 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 A0A1W2PQ09 198 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 NKX2-5P52952 324 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-223ENST00000640640 HERV-K104P61576 105 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 PUDPQ08623 228 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 NR0B2Q15466 257 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 TRMT12Q53H54 448 aaKnown RBP16.34■□□□□ 0.21
SCARB2-223ENST00000640640 SLC6A19Q695T7 634 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 ANKRD34AQ69YU3 496 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 CD93Q9NPY3 652 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 KLF15Q9UIH9 416 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 ICKQ9UPZ9 632 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 QSER1Q2KHR3 1735 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 TEX13CA0A0J9YWL9 993 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 ZFAND5O76080 213 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 GRK5P34947 590 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 RPS5P46782 204 aaKnown RBP16.34■□□□□ 0.21
SCARB2-223ENST00000640640 RACK1P63244 317 aaKnown RBP16.34■□□□□ 0.21
SCARB2-223ENST00000640640 CRMP1Q14194 572 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 DUSP5Q16690 384 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 C9orf50Q5SZB4 431 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 CCDC54Q8NEL0 328 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 MSANTD3Q96H12 275 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 OR2B2Q9GZK3 357 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 MMP28Q9H239 520 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 ANKRD19PQ9H560 264 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 RDH8Q9NYR8 311 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 NUFIP1Q9UHK0 495 aaKnown RBP16.34■□□□□ 0.21
SCARB2-223ENST00000640640 PPIL1Q9Y3C6 166 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 IGLV3-16A0A075B6K0 115 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 A0A1B0GVC2 190 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 A6NIN4 97 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 SULT2B1O00204 365 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 GABRPO00591 440 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 HPGDSO60760 199 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 SCGB1D2O95969 90 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 FPR3P25089 353 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 PRSS3P35030 304 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 RBMXP38159 391 aaKnown RBP16.33■□□□□ 0.21
SCARB2-223ENST00000640640 PBX2P40425 430 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 AFF3P51826 1226 aaKnown RBP16.33■□□□□ 0.21
SCARB2-223ENST00000640640 TMEM196Q5HYL7 178 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 NXNL2Q5VZ03 156 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 ZNF704Q6ZNC4 412 aaPredicted RBP16.33■□□□□ 0.21
SCARB2-223ENST00000640640 RSC1A1Q92681 617 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 OR10A4Q9H209 315 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 SYNPO2LQ9H987 977 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 SLC6A5Q9Y345 797 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 SNX11Q9Y5W9 270 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 DOCK3Q8IZD9 2030 aa16.33■□□□□ 0.21
SCARB2-223ENST00000640640 TPD52L2O43399 206 aaKnown RBP16.33■□□□□ 0.2
SCARB2-223ENST00000640640 SCG5P05408 212 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 GABRA5P31644 462 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 POU3F4P49335 361 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 GARNL3Q5VVW2 1013 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 PTCRAQ6ISU1 281 aaPredicted RBP16.33■□□□□ 0.2
SCARB2-223ENST00000640640 POGLUT1Q8NBL1 392 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 GALNT6Q8NCL4 622 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 OR2A1Q8NGT9 310 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 FGF14Q92915 247 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 MRGPRX1Q96LB2 322 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 LGI1O95970 557 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 LIPAP38571 399 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 HTR3AP46098 478 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 PPP2CBP62714 309 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 VAMP2P63027 116 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 PPP2CAP67775 309 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 TMEM205Q6UW68 189 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 OR14A16Q8NHC5 309 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 CCL4L1Q8NHW4 92 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 ZFPM2Q8WW38 1151 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 SGCDQ92629 289 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 NEDD4LQ96PU5 975 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 LYRM4Q9HD34 91 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 WASH6PQ9NQA3 447 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 DUSP22Q9NRW4 184 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 NDRG4Q9ULP0 352 aaKnown RBP16.33■□□□□ 0.2
SCARB2-223ENST00000640640 DIMT1Q9UNQ2 313 aaKnown RBP16.33■□□□□ 0.2
SCARB2-223ENST00000640640 PRPH2P23942 346 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 ERP29P30040 261 aaKnown RBP16.33■□□□□ 0.2
SCARB2-223ENST00000640640 CHRFAM7AQ494W8 412 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 PLK5Q496M5 336 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 ABHD17BQ5VST6 288 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 DGLUCYQ7Z3D6 616 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms