RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	GBA	P04062	536 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	RPLP1	P05386	114 aa	Known RBP	5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	ALDOC	P09972	364 aa	Known RBP	5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	DPEP1	P16444	411 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	CSF2RB	P32927	897 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	ACVR1B	P36896	505 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	PMEL	P40967	661 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	TAS2R41	P59536	307 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	LSM6	P62312	80 aa	Known RBP	5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	ELAVL2	Q12926	359 aa	Known RBP	5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	ZNF239	Q16600	458 aa	Known RBP	5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	PRSS53	Q2L4Q9	553 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	C5orf47	Q569G3	176 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	RNF130	Q86XS8	419 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	TRAPPC5	Q8IUR0	188 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	ZCCHC10	Q8TBK6	192 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	ACOT12	Q8WYK0	555 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	PGAM5	Q96HS1	289 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	AKR1E2	Q96JD6	320 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	KIR3DX1	Q9H7L2	352 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	ZFP64	Q9NPA5	681 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	POMT2	Q9UKY4	750 aa		5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	BAZ2B	Q9UIF8	2168 aa	Known RBP	5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	EDC4	Q6P2E9	1401 aa	Known RBP	5.73	□□□□□ -1.49
NECAP1-222	ENST00000640072	CPED1	A4D0V7	1026 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SHISA8	B8ZZ34	492 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ZNF195	O14628	629 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	DUX1	O43812	170 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	GDF9	O60383	454 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	CDRT1	O95170	752 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	C6orf47	O95873	294 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TBXA2R	P21731	343 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	CXCR1	P25024	350 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	IDH2	P48735	452 aa	Known RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	LHX1	P48742	406 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	EPHA4	P54764	986 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	DNAJB13	P59910	316 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	CDK6	Q00534	326 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	RBPJ	Q06330	500 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	GTF2H2	Q13888	395 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SLBP	Q14493	270 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TSN	Q15631	228 aa	Known RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	RAB30	Q15771	203 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ZXDC	Q2QGD7	858 aa	Predicted RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	IER5	Q5VY09	327 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	LCN8	Q6JVE9	175 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	GTF2H2C	Q6P1K8	395 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SMARCD3	Q6STE5	483 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TMEM135	Q86UB9	458 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TSPAN33	Q86UF1	283 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	LRRC56	Q8IYG6	542 aa	Predicted RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	C1orf87	Q8N0U7	546 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR10D4P	Q8NGN7	298 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SENP5	Q96HI0	755 aa	Predicted RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	DUX5	Q96PT3	197 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ALG8	Q9BVK2	526 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	NXF2	Q9GZY0	626 aa	Known RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	CACYBP	Q9HB71	228 aa	Known RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	DNAJC4	Q9NNZ3	241 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ACSS2	Q9NR19	701 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SLC9A2	Q9UBY0	812 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR2A25	A4D2G3	310 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	C2orf78	A6NCI8	922 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	C17orf105	B2RV13	164 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	C5orf58	C9J3I9	102 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	UTS2	O95399	124 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	HPR	P00739	348 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	INHA	P05111	366 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	MYOG	P15173	224 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	KLRK1	P26718	216 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	DPP4	P27487	766 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	HTR2A	P28223	471 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	KDELR2	P33947	212 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	RPL22	P35268	128 aa	Known RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	RGS4	P49798	205 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	PNLIPRP2	P54317	469 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ISL1	P61371	349 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SLC35A2	P78381	396 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	PPP1R8	Q12972	351 aa	Known RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ABHD17B	Q5VST6	288 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	CST9LP1	Q5W188	147 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ZNF529	Q6P280	563 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TMPRSS11F	Q6ZWK6	438 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ZNF280B	Q86YH2	543 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ATP6V1C2	Q8NEY4	427 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR5L2	Q8NGL0	311 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR5K1	Q8NHB7	308 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	LCOR	Q96JN0	433 aa	Predicted RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	PRMT6	Q96LA8	375 aa	Predicted RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	CCDC115	Q96NT0	180 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR2M4	Q96R27	311 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR8B4	Q96RC9	309 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TAAR6	Q96RI8	345 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	FUZ	Q9BT04	418 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	AARSD1	Q9BTE6	412 aa	Known RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ADAT1	Q9BUB4	502 aa	Known RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	KATNB1	Q9BVA0	655 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	GATA5	Q9BWX5	397 aa	Predicted RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	PLK3	Q9H4B4	646 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms