RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 TFPTP0C1Z6 253 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 BMP2P12643 396 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 HOXB9P17482 250 aaPredicted RBP15.8■□□□□ 0.12
PTPN11-207ENST00000639857 CRATP43155 626 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 CSNK2A1P68400 391 aaPredicted RBP15.8■□□□□ 0.12
PTPN11-207ENST00000639857 PLAURQ03405 335 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 SYT14P1Q58G82 188 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 TMEM201Q5SNT2 666 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 LRIF1Q5T3J3 769 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 PRAMEF8Q5VWM4 474 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 PRAMEF7Q5VXH5 474 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 FBXW10Q5XX13 1052 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 BLOC1S3Q6QNY0 202 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 ABHD3Q8WU67 409 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 PAIP1Q9H074 479 aaKnown RBP15.8■□□□□ 0.12
PTPN11-207ENST00000639857 RABEP2Q9H5N1 569 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 BCO1Q9HAY6 547 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 KLHL9Q9P2J3 617 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 CHRNA9Q9UGM1 479 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 ST6GALNAC2Q9UJ37 374 aa15.8■□□□□ 0.12
PTPN11-207ENST00000639857 DNPH1O43598 174 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 BCAS1O75363 584 aaPredicted RBP15.79■□□□□ 0.12
PTPN11-207ENST00000639857 THBS1P07996 1170 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 ETFAP13804 333 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 PPIBP23284 216 aaKnown RBP15.79■□□□□ 0.12
PTPN11-207ENST00000639857 SQLEQ14534 574 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 RGNQ15493 299 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 MAPK11Q15759 364 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 LIN52Q52LA3 116 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 MRPL2Q5T653 305 aaKnown RBP15.79■□□□□ 0.12
PTPN11-207ENST00000639857 RNF220Q5VTB9 566 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 TMPPEQ6ZT21 453 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 FUNDC1Q8IVP5 155 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 ATP6V1C2Q8NEY4 427 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 SLC38A5Q8WUX1 472 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 ROBO4Q8WZ75 1007 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 SPDL1Q96EA4 605 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 OR5B2Q96R09 309 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 MED18Q9BUE0 208 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 CACYBPQ9HB71 228 aaKnown RBP15.79■□□□□ 0.12
PTPN11-207ENST00000639857 CLEC4AQ9UMR7 237 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 HDGFL3Q9Y3E1 203 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 PCDHB14Q9Y5E9 798 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 FREM1Q5H8C1 2179 aa15.79■□□□□ 0.12
PTPN11-207ENST00000639857 A0A0G2JPF8 293 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 A0A1W2PNR3 127 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 CDHR4A6H8M9 788 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 CFAP73A6NFT4 308 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 CLDN24A6NM45 220 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 HNRNPCL2B2RXH8 293 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 HNRNPCL3B7ZW38 293 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 CLIC1O00299 241 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 CYTIPO60759 359 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 HNRNPCL1O60812 293 aaKnown RBP15.78■□□□□ 0.12
PTPN11-207ENST00000639857 PMS2P2O95744 297 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 BCHEP06276 602 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 HNRNPCL4P0DMR1 293 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 CD1EP15812 388 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 ENPP1P22413 925 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 CRYGSP22914 178 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 RYKP34925 604 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 DIO1P49895 249 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 LARS2Q15031 903 aaKnown RBP15.78■□□□□ 0.12
PTPN11-207ENST00000639857 GTDC1Q4AE62 458 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 SLC2A7Q6PXP3 512 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 PAMR1Q6UXH9 720 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 CNOT9Q92600 299 aaKnown RBP15.78■□□□□ 0.12
PTPN11-207ENST00000639857 AURKBQ96GD4 344 aaPredicted RBP15.78■□□□□ 0.12
PTPN11-207ENST00000639857 WFIKKN1Q96NZ8 548 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 ARMC7Q9H6L4 198 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 BCL2L10Q9HD36 194 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 A4GALTQ9NPC4 353 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 CCDC167Q9P0B6 97 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 ITGB1BP2Q9UKP3 347 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 CORO2BQ9UQ03 480 aa15.78■□□□□ 0.12
PTPN11-207ENST00000639857 ZNF724A8MTY0 619 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 NR5A2O00482 541 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 SMAD9O15198 467 aaKnown RBP15.77■□□□□ 0.12
PTPN11-207ENST00000639857 ZNF208O43345 1280 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 EDF1O60869 148 aaKnown RBP15.77■□□□□ 0.12
PTPN11-207ENST00000639857 ADAM11O75078 769 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 SASH3O75995 380 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 YES1P07947 543 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 PSMB1P20618 241 aaKnown RBP15.77■□□□□ 0.12
PTPN11-207ENST00000639857 SLC1A3P43003 542 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 IDH2P48735 452 aaKnown RBP15.77■□□□□ 0.12
PTPN11-207ENST00000639857 POLR2HP52434 150 aaKnown RBP15.77■□□□□ 0.12
PTPN11-207ENST00000639857 EPS8Q12929 822 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 PDK3Q15120 406 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 TFAP2EQ6VUC0 442 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 HMGN2P46Q86SG4 172 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 OR52P1PQ8NH57 321 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 NRGNQ92686 78 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 SLC35B4Q969S0 331 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 MBD6Q96DN6 1003 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 ZHX1-C8orf76Q96EF9 292 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 FOXC2Q99958 501 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 PSD2Q9BQI7 771 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 PLEKHF2Q9H8W4 249 aa15.77■□□□□ 0.12
PTPN11-207ENST00000639857 SLC52A3Q9NQ40 469 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms