RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 KLHDC3Q9BQ90 382 aa-0.28□□□□□ -2.45
CCDC7-215ENST00000639629 LRRC2Q9BYS8 371 aa-0.28□□□□□ -2.45
CCDC7-215ENST00000639629 GOLPH3LQ9H4A5 285 aa-0.28□□□□□ -2.45
CCDC7-215ENST00000639629 ZNF430Q9H8G1 570 aaPredicted RBP-0.28□□□□□ -2.45
CCDC7-215ENST00000639629 OR1A1Q9P1Q5 309 aa-0.28□□□□□ -2.45
CCDC7-215ENST00000639629 EPS15L1Q9UBC2 864 aa-0.28□□□□□ -2.45
CCDC7-215ENST00000639629 SIGLEC7Q9Y286 467 aa-0.28□□□□□ -2.45
CCDC7-215ENST00000639629 SPAG9O60271 1321 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 FANCIQ9NVI1 1328 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 FLT4P35916 1363 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 IGKV2-24A0A0C4DH68 120 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 LRRD1A4D1F6 860 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 MED6O75586 246 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 OLFM2O95897 454 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 LHBP01229 141 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 HSPA4P34932 840 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 EVX1P49640 407 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 NUMBP49757 651 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 STX17P56962 302 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 SSTP61278 116 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 PRR3P79522 188 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 GALK2Q01415 458 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 RIPK1Q13546 671 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 SERTAD2Q14140 314 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 EXOSC7Q15024 291 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 DGUOKQ16854 277 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 GSG1Q2KHT4 349 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 AGKQ53H12 422 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 PPP4R4Q6NUP7 873 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 SPATA8Q6RVD6 105 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 RFPL4BQ6ZWI9 263 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 PIWIL3Q7Z3Z3 882 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 EXOC8Q8IYI6 725 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 MIR7-3HGQ8N6C7 128 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 ZNF709Q8N972 641 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 RPLP0P6Q8NHW5 317 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 EXOSC8Q96B26 276 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 NOL4LQ96MY1 436 aaPredicted RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 NABP2Q9BQ15 211 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 DUS2Q9NX74 493 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 ZNF391Q9UJN7 358 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 F11RQ9Y624 299 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 RTEL1-TNFRSF6BF6WH68 1400 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 TRAV40A0A0B4J280 105 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 DNASE2O00115 360 aaPredicted RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 SMR3BP02814 79 aaPredicted RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 PGCP20142 388 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 PRDX3P30048 256 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 FKBP1BP68106 108 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 KLF5Q13887 457 aaPredicted RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 LRRC37A5PQ49AS3 106 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 ABCA11PQ4W5N1 156 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 GPRC6AQ5T6X5 926 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 RAET1LQ5VY80 246 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 C1orf94Q6P1W5 598 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 ZFP2Q6ZN57 461 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 DNM1P46Q6ZS02 220 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 IFNEQ86WN2 208 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 TMEM25Q86YD3 366 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 OR4Q3Q8NH05 313 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 ATP8B4Q8TF62 1192 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 HTR3CQ8WXA8 447 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 LINC00477Q96M19 166 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 ATP6V0BQ99437 205 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 PITX2Q99697 317 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 ZNF649Q9BS31 505 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 RIMS4Q9H426 269 aaPredicted RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 LPAR2Q9HBW0 351 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 MED17Q9NVC6 651 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 FBXO7Q9Y3I1 522 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 MYO5BQ9ULV0 1848 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 LRRK1Q38SD2 2015 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 NUP214P35658 2090 aaPredicted RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 LAMA2P24043 3122 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 ACACAQ13085 2346 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 IGHV2-70DA0A0C4DH43 119 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 C13orf42A0A1B0GVH6 325 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 TSPY2A6NKD2 308 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 MMP23AO75900 390 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 GH1P01241 217 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 SLC4A1P02730 911 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 CHTF8P0CG12 524 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 HNRNPH3P31942 346 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 GP5P40197 560 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 ACADVLP49748 655 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 DIO3P55073 304 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 SLAQ13239 276 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 PDE7AQ13946 482 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 GAMTQ14353 236 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 NKAIN2Q5VXU1 208 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 PRR5LQ6MZQ0 368 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 TTC27Q6P3X3 843 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 H2AFVQ71UI9 128 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 PCP2Q8IVA1 136 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 FAM114A1Q8IWE2 563 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 MTURNQ8N3F0 131 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 VPS37AQ8NEZ2 397 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 OR2AP1Q8NGE2 309 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 CD300LFQ8TDQ1 290 aa-0.29□□□□□ -2.46
CCDC7-215ENST00000639629 CLDN23Q96B33 292 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms