RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 OR13H1Q8NG92 308 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 MAP3K3Q99759 626 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 EMP2P54851 167 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 LPAL2Q16609 132 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 DUSP5Q16690 384 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 PCGF3Q3KNV8 242 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 MBOAT2Q6ZWT7 520 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 GHSRQ92847 366 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 PNPLA2Q96AD5 504 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 COQ10AQ96MF6 247 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 SCGB3A2Q96PL1 93 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 TREM1Q9NP99 234 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 VNN2O95498 520 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 SFTPBP07988 381 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 HOXC8P31273 242 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 SF3A2Q15428 464 aaKnown RBP13.42□□□□□ -0.26
SCARB2-216ENST00000639300 C3orf38Q5JPI3 329 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 MSRB3Q8IXL7 192 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 FRMD1Q8N878 549 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 NPRL2Q8WTW4 380 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 CNOT9Q92600 299 aaKnown RBP13.42□□□□□ -0.26
SCARB2-216ENST00000639300 MKRN2Q9H000 416 aaKnown RBP13.42□□□□□ -0.26
SCARB2-216ENST00000639300 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCARB2-216ENST00000639300 CORINQ9Y5Q5 1042 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 ALG5Q9Y673 324 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 TMEM72A0PK05 275 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 SNRPBP14678 240 aaKnown RBP13.42□□□□□ -0.26
SCARB2-216ENST00000639300 MAKP20794 623 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 PKLRP30613 574 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 AQP2P41181 271 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 POU3F4P49335 361 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 VASPP50552 380 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-216ENST00000639300 NOXA1Q86UR1 476 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 PLCZ1Q86YW0 608 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 INTS14Q96SY0 518 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 ZNF350Q9GZX5 532 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 BOLA1Q9Y3E2 137 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 CACNG2Q9Y698 323 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 SYT5O00445 386 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 ZNF43P17038 809 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 GABRA5P31644 462 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 PBX2P40425 430 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 MRPS21P82921 87 aaKnown RBP13.41□□□□□ -0.26
SCARB2-216ENST00000639300 DPTQ07507 201 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 P2RY14Q15391 338 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 NLGN4YQ8NFZ3 816 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-216ENST00000639300 SLC37A2Q8TED4 501 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 SLC25A44Q96H78 314 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-216ENST00000639300 C7orf34Q96L11 122 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 NMNAT3Q96T66 252 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 OR52A5Q9H2C5 316 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 HHATLQ9HCP6 504 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 SEMA4GQ9NTN9 838 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 TESQ9UGI8 421 aaKnown RBP13.41□□□□□ -0.26
SCARB2-216ENST00000639300 PIP5K1CO60331 668 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 CPNE6O95741 557 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 CD22P20273 847 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 RPS5P46782 204 aaKnown RBP13.41□□□□□ -0.26
SCARB2-216ENST00000639300 ZP2Q05996 745 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 CDKN3Q16667 212 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 SYT14P1Q58G82 188 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 OR7E24Q6IFN5 339 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 BAIAP2L2Q6UXY1 529 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 DGLUCYQ7Z3D6 616 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 ZNF784Q8NCA9 323 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-216ENST00000639300 LSM14AQ8ND56 463 aaKnown RBP13.41□□□□□ -0.26
SCARB2-216ENST00000639300 OR51Q1Q8NH59 317 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 ALG14Q96F25 216 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 COPZ2Q9P299 210 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 DIMT1Q9UNQ2 313 aaKnown RBP13.41□□□□□ -0.26
SCARB2-216ENST00000639300 CD160O95971 181 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 YPEL5P62699 121 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 EIF5AP63241 154 aaKnown RBP13.41□□□□□ -0.26
SCARB2-216ENST00000639300 ZNF511Q8NB15 262 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 FAM71F1Q96KD3 344 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-216ENST00000639300 SYT4Q9H2B2 425 aa13.41□□□□□ -0.26
SCARB2-216ENST00000639300 C14orf166Q9Y224 244 aaKnown RBP13.41□□□□□ -0.26
SCARB2-216ENST00000639300 YARS2Q9Y2Z4 477 aaKnown RBP13.41□□□□□ -0.26
SCARB2-216ENST00000639300 ARPC1BO15143 372 aaKnown RBP13.4□□□□□ -0.26
SCARB2-216ENST00000639300 AQP9O43315 295 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 OR2T1O43869 369 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 SRPX2O60687 465 aaPredicted RBP13.4□□□□□ -0.26
SCARB2-216ENST00000639300 IL33O95760 270 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 CTBP2P56545 445 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 OR7A5Q15622 319 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 OCLNQ16625 522 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 BEST3Q8N1M1 668 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 URM1Q9BTM9 101 aaKnown RBP13.4□□□□□ -0.26
SCARB2-216ENST00000639300 CD93Q9NPY3 652 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 V9GY05 133 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 KDM4EB2RXH2 506 aaPredicted RBP13.4□□□□□ -0.26
SCARB2-216ENST00000639300 EEF1E1-BLOC1S5C9J1V9 151 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 HSPA12AO43301 675 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 RP2O75695 350 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 EGFP01133 1207 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 CD6P30203 668 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 ADPRHP54922 357 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 FOXK2Q01167 660 aa13.4□□□□□ -0.26
SCARB2-216ENST00000639300 EIF2B1Q14232 305 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms