RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 PRKCDQ05655 676 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 MESP2Q0VG99 397 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 ZNF831Q5JPB2 1677 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 GUSBP11Q6P575 273 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 SLITRK4Q8IW52 837 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 MS4A15Q8N5U1 240 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 TP53I13Q8NBR0 393 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-215ENST00000639145 LINC00615Q96LM1 132 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-215ENST00000639145 CCDC74BQ96LY2 380 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 NEDD4LQ96PU5 975 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 CHST8Q9H2A9 424 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 ZNF337Q9Y3M9 751 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 PCDHGA8Q9Y5G5 932 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 DCDC2BA2VCK2 349 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 FAM166BA8MTA8 275 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 MEN1O00255 615 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 FOXD2O60548 495 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-215ENST00000639145 MOSPD3O75425 235 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 GM2AP17900 193 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 FRKP42685 505 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-215ENST00000639145 NDUFA5Q16718 116 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 TRUB1Q8WWH5 349 aaKnown RBP12.64□□□□□ -0.39
SCARB2-215ENST00000639145 ISOC1Q96CN7 298 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 DMRTB1Q96MA1 342 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 TNFRSF13CQ96RJ3 184 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 CHRDQ9H2X0 955 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 THSD1Q9NS62 852 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 PAK1IP1Q9NWT1 392 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-215ENST00000639145 MYOFQ9NZM1 2061 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 SCN4AP35499 1836 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 K7EQS6 105 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 FZD2Q14332 565 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 SF3B4Q15427 424 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCARB2-215ENST00000639145 VASNQ6EMK4 673 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 HSPE1-MOB4S4R3N1 261 aa12.64□□□□□ -0.39
SCARB2-215ENST00000639145 GPX2P18283 190 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 CAMK2DQ13557 499 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 THOC7Q6I9Y2 204 aaKnown RBP12.63□□□□□ -0.39
SCARB2-215ENST00000639145 KDM8Q8N371 416 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 LMF1Q96S06 567 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 INTS14Q96SY0 518 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 PLAC1Q9HBJ0 212 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 VSX1Q9NZR4 365 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-215ENST00000639145 NUFIP1Q9UHK0 495 aaKnown RBP12.63□□□□□ -0.39
SCARB2-215ENST00000639145 MYF6P23409 242 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 NCS1P62166 190 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 DMWDQ09019 674 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 TMEM71Q6P5X7 295 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 SLC35F2Q8IXU6 374 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 LAS2Q8IYD9 372 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 CADM4Q8NFZ8 388 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 ZNF597Q96LX8 424 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 URM1Q9BTM9 101 aaKnown RBP12.63□□□□□ -0.39
SCARB2-215ENST00000639145 NPFFR2Q9Y5X5 522 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 TEX13CA0A0J9YWL9 993 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 TRHRP34981 398 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-215ENST00000639145 FOXC1Q12948 553 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 DUSP7Q16829 419 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 PGGHGQ32M88 737 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 OR5AK2Q8NH90 309 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 CASTOR1Q8WTX7 329 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 NINJ1Q92982 152 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 SPTSSAQ969W0 71 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 NRTNQ99748 197 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 NXF5Q9H1B4 397 aaKnown RBP12.63□□□□□ -0.39
SCARB2-215ENST00000639145 ZNF442Q9H7R0 627 aa12.63□□□□□ -0.39
SCARB2-215ENST00000639145 CENPBD1B2RD01 187 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 H0YJX3 145 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 ZNF432O94892 652 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 HERV-K104P61576 105 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 RBPJQ06330 500 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 SMN1Q16637 294 aaKnown RBP12.62□□□□□ -0.39
SCARB2-215ENST00000639145 ZNF385BQ569K4 471 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 OR7E24Q6IFN5 339 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 MRPL21Q7Z2W9 205 aaKnown RBP12.62□□□□□ -0.39
SCARB2-215ENST00000639145 PELI3Q8N2H9 469 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 ABHD11Q8NFV4 315 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 FUNDC2Q9BWH2 189 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 PARPBPQ9NWS1 579 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 TMED7-TICAM2A0A0A6YYA0 188 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 MSX1P28360 303 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 AP2S1P53680 142 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-215ENST00000639145 AAED1Q7RTV5 226 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 B3GNT7Q8NFL0 401 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 C15orf40Q8WUR7 153 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 SLC22A4Q9H015 551 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 POMT2Q9UKY4 750 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 TMED7Q9Y3B3 224 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 SLC22A7Q9Y694 548 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 NINQ8N4C6 2090 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 GASTP01350 101 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 IGHG1P01857 330 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 ERCC1P07992 297 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-215ENST00000639145 ZNF35P13682 527 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 CD1EP15812 388 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 PDE7AQ13946 482 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 TMEM69Q5SWH9 247 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 PGM2L1Q6PCE3 622 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 TMEM178AQ8NBL3 297 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 OR7G2Q8NG99 324 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms