RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TIMP2P16035 220 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 CLDN6P56747 220 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 PLXDC1Q8IUK5 500 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 OR14L1PQ8NHC6 308 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 MICU1Q9BPX6 476 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 C11orf54Q9H0W9 315 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-213ENST00000638680 GALNT9Q9HCQ5 603 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 BOLA1Q9Y3E2 137 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 FUCA1P04066 466 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 CX3CR1P49238 355 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 SLC22A6Q4U2R8 563 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 HRASLS5Q96KN8 279 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 APOOQ9BUR5 198 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 KLHL13Q9P2N7 655 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 RARRES3Q9UL19 164 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 A0A1W2PS29 197 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 TRIM64BA6NI03 449 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 ITGB7P26010 798 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 GDNFP39905 211 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 SLC1A3P43003 542 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 TGM4P49221 684 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 HBMQ6B0K9 141 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 SBSNQ6UWP8 590 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 ABHD12BQ7Z5M8 362 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-213ENST00000638680 LYSMD2Q8IV50 215 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 CSNK1G1Q9HCP0 422 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 FBXL2Q9UKC9 423 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 POLHQ9Y253 713 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 OR6C65A6NJZ3 312 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 HIST1H1TP22492 207 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-213ENST00000638680 APEX1P27695 318 aaKnown RBP17.29■□□□□ 0.36
SCARB2-213ENST00000638680 RABIFP47224 123 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 GPR18Q14330 331 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 ARHGAP19Q14CB8 494 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 PKDCCQ504Y2 493 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 C3orf38Q5JPI3 329 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 PARS2Q7L3T8 475 aaKnown RBP17.29■□□□□ 0.36
SCARB2-213ENST00000638680 GPR155Q7Z3F1 870 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 LRRC56Q8IYG6 542 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-213ENST00000638680 LMNTD1Q8N9Z9 388 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 OR51Q1Q8NH59 317 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 KHSRPQ92945 711 aaKnown RBP eCLIP17.29■□□□□ 0.36
SCARB2-213ENST00000638680 RPH3AQ9Y2J0 694 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-213ENST00000638680 SDC3O75056 442 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 WDPCPO95876 746 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 SMIM18P0DKX4 95 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 PIGAP37287 484 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 CLDN12P56749 244 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 PELI3Q8N2H9 469 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 ISG20Q96AZ6 181 aaKnown RBP17.28■□□□□ 0.36
SCARB2-213ENST00000638680 LPAR4Q99677 370 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 ELOVL3Q9HB03 270 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 A0A0J9YY10 115 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 ZNF705GA8MUZ8 300 aaPredicted RBP17.28■□□□□ 0.36
SCARB2-213ENST00000638680 GABARAPO95166 117 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 M6PRP20645 277 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 TNK1Q13470 666 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 SLC9A3R2Q15599 337 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 LKAAEAR1Q8TD35 194 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 LIN37Q96GY3 246 aaPredicted RBP17.28■□□□□ 0.36
SCARB2-213ENST00000638680 STRADBQ9C0K7 418 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 PTTG3PQ9NZH4 202 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 LTBP3Q9NS15 1303 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 CDHR4A6H8M9 788 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 PROS1P07225 676 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 PRLHRP49683 370 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 CDK3Q00526 305 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 RBMS2Q15434 407 aaKnown RBP17.28■□□□□ 0.36
SCARB2-213ENST00000638680 ADPRMQ3LIE5 342 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 GGTA1PQ4G0N0 100 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 RNF128Q8TEB7 428 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 HHIPL1Q96JK4 782 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 AP1G1O43747 822 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 P2RY2P41231 377 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 IRF4Q15306 451 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 DUSP7Q16829 419 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 TECPR1Q7Z6L1 1165 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 TRAPPC6BQ86SZ2 158 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 LMF2Q9BU23 707 aaKnown RBP17.28■□□□□ 0.36
SCARB2-213ENST00000638680 BTBD2Q9BX70 525 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 GPATCH2Q9NW75 528 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 FTSJ1Q9UET6 329 aa17.28■□□□□ 0.36
SCARB2-213ENST00000638680 COL2A1P02458 1487 aaPredicted RBP17.28■□□□□ 0.36
SCARB2-213ENST00000638680 METTL15A6NJ78 407 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 ACOD1A6NK06 481 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 FBXO24O75426 580 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 CPNE6O95741 557 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 PRKAR1BP31321 381 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 SMAP2Q8WU79 429 aaPredicted RBP17.27■□□□□ 0.36
SCARB2-213ENST00000638680 SLC38A5Q8WUX1 472 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 SORCS2Q96PQ0 1159 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 TCEAL7Q9BRU2 100 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 TMEM100Q9NV29 134 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 USP3Q9Y6I4 520 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 A0A0D9SG52 128 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 SEMA4FO95754 770 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 SLC10A3P09131 477 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 C1SP09871 688 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 SHC1P29353 583 aa17.27■□□□□ 0.36
SCARB2-213ENST00000638680 POLR2HP52434 150 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms