RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 POLR2JP52435 117 aaKnown RBP15.76■□□□□ 0.11
PNKP-230ENST00000638016 GSTA3Q16772 222 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 DEFB113Q30KQ7 82 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 SYT14P1Q58G82 188 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 TMEM201Q5SNT2 666 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 AP1ARQ63HQ0 302 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 ALKBH2Q6NS38 261 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 LRRC74BQ6ZQY2 392 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 CXorf67Q86X51 503 aaPredicted RBP15.76■□□□□ 0.11
PNKP-230ENST00000638016 VRK2Q86Y07 508 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 ACTR6Q9GZN1 396 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 TIGARQ9NQ88 270 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.76■□□□□ 0.11
PNKP-230ENST00000638016 RLIMQ9NVW2 624 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 ZNF226Q9NYT6 803 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 PRSS50Q9UI38 385 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 ARID1AO14497 2285 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 DSCAMO60469 2012 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 ZNF814B7Z6K7 855 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 GCM2O75603 506 aaPredicted RBP15.75■□□□□ 0.11
PNKP-230ENST00000638016 PRKD3O94806 890 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 GOSR1O95249 250 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 ANP32DO95626 131 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 BCHEP06276 602 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 NUDT7P0C024 238 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 TFPIP10646 304 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 CRATP43155 626 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 DIO1P49895 249 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 IDH3AP50213 366 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 RAC3P60763 192 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 RNPS1Q15287 305 aaKnown RBP15.75■□□□□ 0.11
PNKP-230ENST00000638016 C6orf10Q5SRN2 563 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 MRPL2Q5T653 305 aaKnown RBP15.75■□□□□ 0.11
PNKP-230ENST00000638016 ADGRG3Q86Y34 549 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 WFDC8Q8IUA0 241 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 GABRG1Q8N1C3 465 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 MIER2Q8N344 545 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 ARFGAP2Q8N6H7 521 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 LRRC8CQ8TDW0 803 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 WDR60Q8WVS4 1066 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 TMEM234Q8WY98 164 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 MBD6Q96DN6 1003 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 UBTD1Q9HAC8 227 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 TPT1P8Q9HAU6 139 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 LIPT1Q9Y234 373 aa15.75■□□□□ 0.11
PNKP-230ENST00000638016 CADP27708 2225 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.74■□□□□ 0.11
PNKP-230ENST00000638016 KLF4O43474 513 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 RAMP1O60894 148 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 KRT75O95678 551 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 PLAUP00749 431 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 PABPC4LP0CB38 370 aaKnown RBP15.74■□□□□ 0.11
PNKP-230ENST00000638016 GKN3PP0CG01 181 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 FOXD4Q12950 439 aaPredicted RBP15.74■□□□□ 0.11
PNKP-230ENST00000638016 GTF2IRD2BQ6EKJ0 949 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 ZNF836Q6ZNA1 936 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 TMPPEQ6ZT21 453 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 BEND4Q6ZU67 534 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 GRINAQ7Z429 371 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 ATG4DQ86TL0 474 aaPredicted RBP15.74■□□□□ 0.11
PNKP-230ENST00000638016 GTF2IRD2Q86UP8 949 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 TGIF2LYQ8IUE0 185 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 KRTAP1-3Q8IUG1 177 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 FUNDC1Q8IVP5 155 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 C10orf111Q8N326 155 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 WFDC11Q8NEX6 87 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 GTF2H4Q92759 462 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 S100PBPQ96BU1 408 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 THOC1Q96FV9 657 aaKnown RBP15.74■□□□□ 0.11
PNKP-230ENST00000638016 ITCHQ96J02 903 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 ALPK1Q96QP1 1244 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 PAIP1Q9H074 479 aaKnown RBP15.74■□□□□ 0.11
PNKP-230ENST00000638016 TCF7L2Q9NQB0 619 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 EXOSC3Q9NQT5 275 aaKnown RBP15.74■□□□□ 0.11
PNKP-230ENST00000638016 SERINC1Q9NRX5 453 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 SLAMF8Q9P0V8 285 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 CHRNA9Q9UGM1 479 aa15.74■□□□□ 0.11
PNKP-230ENST00000638016 FLNAP21333 2647 aaKnown RBP15.74■□□□□ 0.11
PNKP-230ENST00000638016 DSPPQ9NZW4 1301 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 TMEM72A0PK05 275 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 ZC3H12DA2A288 527 aaKnown RBP15.73■□□□□ 0.11
PNKP-230ENST00000638016 FAM234BA2RU67 622 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 SULT2B1O00204 365 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 CYTIPO60759 359 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 YES1P07947 543 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 ZCCHC18P0CG32 403 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 IL7RP16871 459 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 HOXB9P17482 250 aaPredicted RBP15.73■□□□□ 0.11
PNKP-230ENST00000638016 AQP5P55064 265 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 DSTNP60981 165 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 ADAM8P78325 824 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 LRRC74AQ0VAA2 488 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 RASGEF1BQ0VAM2 473 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 STK32CQ86UX6 486 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 SLC38A5Q8WUX1 472 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 OIT3Q8WWZ8 545 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 MAL2Q969L2 176 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 TMEM19Q96HH6 336 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 TMUB1Q9BVT8 246 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 BCO1Q9HAY6 547 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms