RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 MED13LQ71F56 2210 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 TEP1Q99973 2627 aaKnown RBP16.87■□□□□ 0.29
CLN6-221ENST00000637494 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.87■□□□□ 0.29
CLN6-221ENST00000637494 TMEM247A6NEH6 219 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 KLF11O14901 512 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 UBDO15205 165 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 GSNP06396 782 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 NID1P14543 1247 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 FOSL1P15407 271 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 HTR3AP46098 478 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 DIO1P49895 249 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 P2RY6Q15077 328 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 SYPL1Q16563 259 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 ALKBH2Q6NS38 261 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 TMPPEQ6ZT21 453 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 PNPT1Q8TCS8 783 aaKnown RBP16.87■□□□□ 0.29
CLN6-221ENST00000637494 WDR60Q8WVS4 1066 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 MAELQ96JY0 434 aaKnown RBP16.87■□□□□ 0.29
CLN6-221ENST00000637494 BCO1Q9HAY6 547 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 CALML5Q9NZT1 146 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 ZIM2Q9NZV7 527 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 CHRNA9Q9UGM1 479 aa16.87■□□□□ 0.29
CLN6-221ENST00000637494 CYTIPO60759 359 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 DBIP07108 87 aaKnown RBP16.86■□□□□ 0.29
CLN6-221ENST00000637494 THBDP07204 575 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 CDKN2CP42773 168 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 CLK1P49759 484 aaKnown RBP16.86■□□□□ 0.29
CLN6-221ENST00000637494 SLC9B1Q4ZJI4 515 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 SFRP5Q5T4F7 317 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 AGBL2Q5U5Z8 902 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 MSANTD1Q6ZTZ1 278 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 PEX5LQ8IYB4 626 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 LRRC75A-AS1Q8N1F1 130 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 ANKFN1Q8N957 763 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 ZNF75CPQ92670 426 aaPredicted RBP16.86■□□□□ 0.29
CLN6-221ENST00000637494 KISS1RQ969F8 398 aaPredicted RBP16.86■□□□□ 0.29
CLN6-221ENST00000637494 ZNF524Q96C55 264 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 ITCHQ96J02 903 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 MARK4Q96L34 752 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 PSD2Q9BQI7 771 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 CTPS2Q9NRF8 586 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 P2RX2Q9UBL9 471 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 HDGFL3Q9Y3E1 203 aa16.86■□□□□ 0.29
CLN6-221ENST00000637494 HRNRQ86YZ3 2850 aaPredicted RBP16.85■□□□□ 0.29
CLN6-221ENST00000637494 AGAP5A6NIR3 686 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 ZNF724A8MTY0 619 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 SMAD9O15198 467 aaKnown RBP16.85■□□□□ 0.29
CLN6-221ENST00000637494 DIAPH2O60879 1101 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 ADAP00813 363 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 FESP07332 822 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 CRATP43155 626 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 IDH2P48735 452 aaKnown RBP16.85■□□□□ 0.29
CLN6-221ENST00000637494 STX1BP61266 288 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 ITGADQ13349 1161 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 ZNF704Q6ZNC4 412 aaPredicted RBP16.85■□□□□ 0.29
CLN6-221ENST00000637494 GALNT5Q7Z7M9 940 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 HMGN2P46Q86SG4 172 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 MTDHQ86UE4 582 aaKnown RBP16.85■□□□□ 0.29
CLN6-221ENST00000637494 ZNF440Q8IYI8 595 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 ZNF100Q8IYN0 542 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 GABRG1Q8N1C3 465 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 MIER2Q8N344 545 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 HSD17B8Q92506 261 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 S100PBPQ96BU1 408 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 DDIT4LQ96D03 193 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 ZG16BQ96DA0 208 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 PLPPR2Q96GM1 343 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 HS3ST6Q96QI5 342 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 CCDC106Q9BWC9 280 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 SLC38A1Q9H2H9 487 aa16.85■□□□□ 0.29
CLN6-221ENST00000637494 THUMPD1Q9NXG2 353 aaKnown RBP16.85■□□□□ 0.29
CLN6-221ENST00000637494 PRRC2AP48634 2157 aaKnown RBP16.84■□□□□ 0.29
CLN6-221ENST00000637494 KLF4O43474 513 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 DNPH1O43598 174 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 GCM2O75603 506 aaPredicted RBP16.84■□□□□ 0.29
CLN6-221ENST00000637494 PMS2P2O95744 297 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 CHRM4P08173 479 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 ZCCHC18P0CG32 403 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 HOXC12P31275 282 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 OR3A2P47893 321 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 POLR2HP52434 150 aaKnown RBP16.84■□□□□ 0.29
CLN6-221ENST00000637494 POLR2JP52435 117 aaKnown RBP16.84■□□□□ 0.29
CLN6-221ENST00000637494 CRISP3P54108 245 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 CAPRIN1Q14444 709 aaKnown RBP16.84■□□□□ 0.29
CLN6-221ENST00000637494 C6orf10Q5SRN2 563 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 DNAJC14Q6Y2X3 702 aaPredicted RBP16.84■□□□□ 0.29
CLN6-221ENST00000637494 Q6ZT83 130 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 C22orf34Q6ZV56 151 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 BHLHA15Q7RTS1 189 aaPredicted RBP16.84■□□□□ 0.29
CLN6-221ENST00000637494 WFDC11Q8NEX6 87 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 PIGXQ8TBF5 258 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 LRRC8CQ8TDW0 803 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 CNOT9Q92600 299 aaKnown RBP16.84■□□□□ 0.29
CLN6-221ENST00000637494 RAD21L1Q9H4I0 556 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 ARMC7Q9H6L4 198 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 ESRP2Q9H6T0 727 aaKnown RBP16.84■□□□□ 0.29
CLN6-221ENST00000637494 SDR39U1Q9NRG7 319 aaPredicted RBP16.84■□□□□ 0.29
CLN6-221ENST00000637494 USH1CQ9Y6N9 552 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 AKAP6Q13023 2319 aa16.84■□□□□ 0.29
CLN6-221ENST00000637494 PRAMEF27A3QJZ7 478 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms