RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 TSEN54Q7Z6J9 526 aaKnown RBP11.45□□□□□ -0.58
PNKP-217ENST00000625216 AMIGO2Q86SJ2 522 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 ARMC8Q8IUR7 673 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 LIX1LQ8IVB5 337 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 OR14L1PQ8NHC6 308 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 LRRC46Q96FV0 321 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 LURAP1Q96LR2 239 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 ZNF607Q96SK3 696 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 SAP130Q9H0E3 1048 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 MCCC2Q9HCC0 563 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 HHATLQ9HCP6 504 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 C6orf203Q9P0P8 240 aaPredicted RBP11.45□□□□□ -0.58
PNKP-217ENST00000625216 KCNN3Q9UGI6 736 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 MKLN1Q9UL63 735 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 CBLCQ9ULV8 474 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 ABCG2Q9UNQ0 655 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 CAMK2AQ9UQM7 478 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 EML6Q6ZMW3 1958 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 FBN2P35556 2912 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 SYT5O00445 386 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 CASQ2O14958 399 aaPredicted RBP11.44□□□□□ -0.58
PNKP-217ENST00000625216 IL33O95760 270 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 IFNA14P01570 189 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 PABPC4LP0CB38 370 aaKnown RBP11.44□□□□□ -0.58
PNKP-217ENST00000625216 CYP4B1P13584 511 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 PEX2P28328 305 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 KCNJ5P48544 419 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 CLK3P49761 638 aaKnown RBP11.44□□□□□ -0.58
PNKP-217ENST00000625216 GAS1P54826 345 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 TLE4Q04727 773 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 ATP6AP1Q15904 470 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 DUSP7Q16829 419 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 IFI44LQ53G44 452 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 FKBP9P1Q75LS8 142 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 VRK2Q86Y07 508 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 KRT73Q86Y46 540 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 ZDHHC21Q8IVQ6 265 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 ZNF619Q8N2I2 560 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 POP5Q969H6 163 aaKnown RBP11.44□□□□□ -0.58
PNKP-217ENST00000625216 EFHD2Q96C19 240 aaPredicted RBP11.44□□□□□ -0.58
PNKP-217ENST00000625216 ZG16BQ96DA0 208 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 C7orf34Q96L11 122 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 TAS2R10Q9NYW0 307 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 STOML1Q9UBI4 398 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 KCNE5Q9UJ90 142 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 CHST2Q9Y4C5 530 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 CACNA1CQ13936 2221 aa11.44□□□□□ -0.58
PNKP-217ENST00000625216 MBD3L4A6NDZ8 208 aaPredicted RBP11.43□□□□□ -0.58
PNKP-217ENST00000625216 MBD3L3A6NE82 208 aaPredicted RBP11.43□□□□□ -0.58
PNKP-217ENST00000625216 MBD3L5A6NJ08 208 aaPredicted RBP11.43□□□□□ -0.58
PNKP-217ENST00000625216 hCG_2039718K7EN88 272 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 FADS1O60427 444 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 STX11O75558 287 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 DIRAS1O95057 198 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 FABP3P05413 133 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 FESP07332 822 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 FCGR1AP12314 374 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 CHMP24386 653 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 FASP25445 335 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 EVI2BP34910 448 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 RFX3P48380 749 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 GFRA1P56159 465 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 DSCR4P56555 118 aaPredicted RBP11.43□□□□□ -0.58
PNKP-217ENST00000625216 TRIP10Q15642 601 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 GPR68Q15743 365 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 MAPK14Q16539 360 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 BCL2A1Q16548 175 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 LPCAT4Q643R3 524 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 DHRS4L2Q6PKH6 230 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 EPHX4Q8IUS5 362 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 OR4K17Q8NGC6 315 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 OR4D11Q8NGI4 311 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 MBD3L2Q8NHZ7 208 aaPredicted RBP11.43□□□□□ -0.58
PNKP-217ENST00000625216 GEMIN6Q8WXD5 167 aaKnown RBP11.43□□□□□ -0.58
PNKP-217ENST00000625216 LZICQ8WZA0 190 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 UCN2Q96RP3 112 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 TRIB1Q96RU8 372 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 WFDC6Q9BQY6 131 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 SEMA6AQ9H2E6 1030 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 IL1RAPQ9NPH3 570 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 POLE3Q9NRF9 147 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 VNN3Q9NY84 501 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 FOXD3Q9UJU5 478 aaPredicted RBP11.43□□□□□ -0.58
PNKP-217ENST00000625216 ZNF443Q9Y2A4 671 aaPredicted RBP11.43□□□□□ -0.58
PNKP-217ENST00000625216 DCHS2Q6V1P9 2916 aa11.43□□□□□ -0.58
PNKP-217ENST00000625216 PHF3Q92576 2039 aaKnown RBP11.43□□□□□ -0.58
PNKP-217ENST00000625216 CSMD1Q96PZ7 3565 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 AGAP5A6NIR3 686 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 SAC3D1A6NKF1 404 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 NPIPB9F8W1W9 429 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 LINC01387J3KSC0 135 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 M0R3H8 397 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 SERPINB7O75635 380 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 SOX30O94993 753 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 PRSS23O95084 383 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 IL18BPO95998 194 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 GUSBP08236 651 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 CTSSP25774 331 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 DPP4P27487 766 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 OPRM1P35372 400 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms