RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 STHQ8IWL8 128 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 MICU2Q8IYU8 434 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 ST13P4Q8IZP2 240 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-229ENST00000621897 SAMD12Q8N8I0 201 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 KCNG3Q8TAE7 436 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 LRRC20Q8TCA0 184 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 TOP1MTQ969P6 601 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 PINX1Q96BK5 328 aaKnown RBP3.07□□□□□ -1.92
BRCA1-229ENST00000621897 CHMP6Q96FZ7 201 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 TGS1Q96RS0 853 aaKnown RBP3.07□□□□□ -1.92
BRCA1-229ENST00000621897 SLC29A1Q99808 456 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 TMEM175Q9BSA9 504 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 IDI2Q9BXS1 227 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 IL22Q9GZX6 179 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 SMYD3Q9H7B4 428 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 VIPAS39Q9H9C1 493 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 CALHM2Q9HA72 323 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 PDFQ9HBH1 243 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 TUBG2Q9NRH3 451 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 MRPL22Q9NWU5 206 aaKnown RBP3.07□□□□□ -1.92
BRCA1-229ENST00000621897 SLC39A1Q9NY26 324 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 SLC2A8Q9NY64 477 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 RCOR3Q9P2K3 495 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-229ENST00000621897 TBC1D24Q9ULP9 559 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 NINLQ9Y2I6 1382 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 PEG3Q9GZU2 1588 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 A0A1B0GUH1 482 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 TMEM89A2RUT3 159 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 SAP18O00422 153 aaKnown RBP3.06□□□□□ -1.92
BRCA1-229ENST00000621897 INSRP06213 1382 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 CRYGBP07316 175 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 CA3P07451 260 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 CCL2P13500 99 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 LCN1P31025 176 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 PRDX2P32119 198 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 CRATP43155 626 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 BCAP31P51572 246 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 RGS8P57771 180 aaPredicted RBP3.06□□□□□ -1.92
BRCA1-229ENST00000621897 RAB11AP62491 216 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 MYBPC1Q00872 1141 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 DGCR6Q14129 220 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 RCAN2Q14206 197 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 GPR176Q14439 515 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 SLC17A1Q14916 467 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 RAB11BQ15907 218 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 SNCBQ16143 134 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 HKDC1Q2TB90 917 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 DCAF4L1Q3SXM0 396 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 SMUG1Q53HV7 270 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 XKR7Q5GH72 579 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 ASPHD2Q6ICH7 369 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 TMEM53Q6P2H8 277 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 SLC39A4Q6P5W5 647 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 TMEM220Q6QAJ8 160 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 SIGLEC15Q6ZMC9 328 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 EIF3MQ7L2H7 374 aaKnown RBP3.06□□□□□ -1.92
BRCA1-229ENST00000621897 C16orf62Q7Z3J2 963 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 SLC22A18ASQ8N1D0 253 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 LRRC17Q8N6Y2 441 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 CEP112Q8N8E3 955 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 OR5D13Q8NGL4 314 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 PNPT1Q8TCS8 783 aaKnown RBP3.06□□□□□ -1.92
BRCA1-229ENST00000621897 GIPC3Q8TF64 312 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 SCFD1Q8WVM8 642 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 GGHQ92820 318 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 PHYHIPLQ96FC7 376 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 CASD1Q96PB1 797 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 TSG101Q99816 390 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 C9orf16Q9BUW7 83 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 ZNF160Q9HCG1 818 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 ZNF275Q9NSD4 429 aaPredicted RBP3.06□□□□□ -1.92
BRCA1-229ENST00000621897 FKBP14Q9NWM8 211 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 STOX2Q9P2F5 926 aaPredicted RBP3.06□□□□□ -1.92
BRCA1-229ENST00000621897 CDH9Q9ULB4 789 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 DDX19BQ9UMR2 479 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 MAD1L1Q9Y6D9 718 aa3.06□□□□□ -1.92
BRCA1-229ENST00000621897 ADCY9O60503 1353 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 GSTTP1A0A1W2PQM5 241 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 SNTNA6NMZ2 147 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 C9JVG2 144 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 PDLIM1O00151 329 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 FOXE1O00358 373 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 EEF2KO00418 725 aaKnown RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 ABCD4O14678 606 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 CALUO43852 315 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 HCN1O60741 890 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 AHSA1O95433 338 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 CPNE6O95741 557 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 PROS1P07225 676 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 SFTPBP07988 381 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 CCNB1P14635 433 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 MAT2AP31153 395 aaKnown RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 OTX1P32242 354 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 FDFT1P37268 417 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 NAA10P41227 235 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 TNFRSF4P43489 277 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 SLC6A8P48029 635 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 KCNJ3P48549 501 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 CCL11P51671 97 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 NAPAP54920 295 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms