RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 SYT14P1Q58G82 188 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 AP1ARQ63HQ0 302 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 FRRS1Q6ZNA5 592 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 TMPPEQ6ZT21 453 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 Q6ZT83 130 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 ZNF611Q8N823 705 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 FAM71CQ8NEG0 241 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 AKAP1Q92667 903 aaKnown RBP eCLIP21.31■■□□□ 1
ATXN3-253ENST00000621269 ZNF775Q96BV0 537 aaPredicted RBP21.31■■□□□ 1
ATXN3-253ENST00000621269 PANX1Q96RD7 426 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 ESRP2Q9H6T0 727 aaKnown RBP21.31■■□□□ 1
ATXN3-253ENST00000621269 AIG1Q9NVV5 245 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 ING1Q9UK53 422 aaPredicted RBP21.31■■□□□ 1
ATXN3-253ENST00000621269 ZNF724A8MTY0 619 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 ZNF814B7Z6K7 855 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 H7C1Q1 480 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 TMCC2O75069 709 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 FESP07332 822 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 ALDOCP09972 364 aaKnown RBP21.3■■□□□ 1
ATXN3-253ENST00000621269 ANXA11P50995 505 aaKnown RBP21.3■■□□□ 1
ATXN3-253ENST00000621269 KCNJ10P78508 379 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 TAB1Q15750 504 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 BHLHA15Q7RTS1 189 aaPredicted RBP21.3■■□□□ 1
ATXN3-253ENST00000621269 ARFGAP2Q8N6H7 521 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 ZG16BQ96DA0 208 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 TEX37Q96LM6 180 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 OR52E6Q96RD3 313 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 ZBTB18Q99592 522 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 RNF115Q9Y4L5 304 aa21.3■■□□□ 1
ATXN3-253ENST00000621269 CCDC154A6NI56 674 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 TRPC5OSA6NMA1 111 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 HMGN4O00479 90 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 SDHDO14521 159 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 CD3EP07766 207 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 FKBP2P26885 142 aaKnown RBP21.29■■□□□ 1
ATXN3-253ENST00000621269 CHRNEQ04844 493 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 LRRC74AQ0VAA2 488 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 ZNF621Q6ZSS3 439 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 GALNT5Q7Z7M9 940 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 HMGN2P46Q86SG4 172 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 RNF130Q86XS8 419 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 ZNF100Q8IYN0 542 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 RAB3IL1Q8TBN0 382 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 ZHX1-C8orf76Q96EF9 292 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 COX4I2Q96KJ9 171 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 ZNF300Q96RE9 604 aaPredicted RBP21.29■■□□□ 1
ATXN3-253ENST00000621269 CCDC106Q9BWC9 280 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 POTEKPQ9BYX7 375 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 EXOSC3Q9NQT5 275 aaKnown RBP21.29■■□□□ 1
ATXN3-253ENST00000621269 CTPS2Q9NRF8 586 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 THAP1Q9NVV9 213 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 EMC3Q9P0I2 261 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 CHRNA9Q9UGM1 479 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 PRSS50Q9UI38 385 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 LIPT1Q9Y234 373 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 ACANP16112 2415 aa21.29■■□□□ 1
ATXN3-253ENST00000621269 NUP214P35658 2090 aaPredicted RBP21.28■■□□□ 1
ATXN3-253ENST00000621269 SMAD7O15105 426 aaKnown RBP21.28■■□□□ 1
ATXN3-253ENST00000621269 HDAC3O15379 428 aa21.28■■□□□ 1
ATXN3-253ENST00000621269 CLOCKO15516 846 aa21.28■■□□□ 1
ATXN3-253ENST00000621269 BCAS1O75363 584 aaPredicted RBP21.28■■□□□ 1
ATXN3-253ENST00000621269 PGRP06401 933 aa21.28■■□□□ 1
ATXN3-253ENST00000621269 HEXAP06865 529 aa21.28■■□□□ 1
ATXN3-253ENST00000621269 TXNL4AP83876 142 aaKnown RBP21.28■■□□□ 1
ATXN3-253ENST00000621269 NCMAPQ5T1S8 102 aa21.28■■□□□ 1
ATXN3-253ENST00000621269 GRINAQ7Z429 371 aa21.28■■□□□ 1
ATXN3-253ENST00000621269 MTDHQ86UE4 582 aaKnown RBP21.28■■□□□ 1
ATXN3-253ENST00000621269 CIARTQ8N365 385 aaPredicted RBP21.28■■□□□ 1
ATXN3-253ENST00000621269 IGFBPL1Q8WX77 278 aa21.28■■□□□ 1
ATXN3-253ENST00000621269 TRNT1Q96Q11 434 aaKnown RBP21.28■■□□□ 1
ATXN3-253ENST00000621269 WDR55Q9H6Y2 383 aaPredicted RBP21.28■■□□□ 1
ATXN3-253ENST00000621269 RAI1Q7Z5J4 1906 aaPredicted RBP21.27■■□□□ 1
ATXN3-253ENST00000621269 GOLGA8QA0A0J9YX86 632 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 TMEM120BA0PK00 339 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 PRAMEF27A3QJZ7 478 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 GOLGA8OA6NCC3 632 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 GOLGA8NF8WBI6 632 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 LYZL6O75951 148 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 PAX1P15863 534 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 EPHA3P29320 983 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 SYPL1Q16563 259 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 ADAM5Q6NVV9 412 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 CMIPQ8IY22 773 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 ANKFN1Q8N957 763 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 MGARPQ8TDB4 240 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 ZNF75CPQ92670 426 aaPredicted RBP21.27■■□□□ 1
ATXN3-253ENST00000621269 INPP5KQ9BT40 448 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 LAMP3Q9UQV4 416 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 GPR45Q9Y5Y3 372 aa21.27■■□□□ 1
ATXN3-253ENST00000621269 TRIM64A6NGJ6 449 aa21.26■□□□□ 0.99
ATXN3-253ENST00000621269 TRIM64BA6NI03 449 aa21.26■□□□□ 0.99
ATXN3-253ENST00000621269 CLDN24A6NM45 220 aa21.26■□□□□ 0.99
ATXN3-253ENST00000621269 SLCO1B7G3V0H7 640 aa21.26■□□□□ 0.99
ATXN3-253ENST00000621269 PMS2P2O95744 297 aa21.26■□□□□ 0.99
ATXN3-253ENST00000621269 C1QCP02747 245 aa21.26■□□□□ 0.99
ATXN3-253ENST00000621269 KITP10721 976 aa21.26■□□□□ 0.99
ATXN3-253ENST00000621269 IL12AP29459 219 aa21.26■□□□□ 0.99
ATXN3-253ENST00000621269 IDH2P48735 452 aaKnown RBP21.26■□□□□ 0.99
ATXN3-253ENST00000621269 CLK1P49759 484 aaKnown RBP21.26■□□□□ 0.99
ATXN3-253ENST00000621269 WDR4P57081 412 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms