RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 UBL3O95164 117 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 KLF8O95600 359 aaPredicted RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 RPS15AP62244 130 aaKnown RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR2F1Q13607 317 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 PLGLAQ15195 96 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 UQCC3Q6UW78 93 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 SBSNQ6UWP8 590 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 SERPINA11Q86U17 422 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 GPR137CQ8N3F9 429 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 C14orf79Q96F83 325 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 UBXN10Q96LJ8 280 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 EXOSC3Q9NQT5 275 aaKnown RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 RNF24Q9Y225 148 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 A0A1W2PQ09 198 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 AHSGP02765 367 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 MLLT10P55197 1068 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 CD81P60033 236 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ERVFC1P60507 584 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 C11orf91Q3C1V1 193 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR56B1Q8NGI3 324 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR13C2Q8NGS9 318 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 TMEM175Q9BSA9 504 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 SLC12A9Q9BXP2 914 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 NENFQ9UMX5 172 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 SMIM28A0A1B0GU29 152 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 XKRY2A2RUG3 117 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 A6NL46 340 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ANKRD66B4E2M5 251 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 CACNG3O60359 315 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 SIX3O95343 332 aaPredicted RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 HLA-DQB2P05538 268 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 MGST1P10620 155 aaKnown RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 TYRP1P17643 537 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ITGB5P18084 799 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 TNFSF4P23510 183 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 NAA10P41227 235 aaPredicted RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 EVX2Q03828 476 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 MGAT3Q09327 533 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 GALNT2Q10471 571 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ENTHD1Q8IYW4 607 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR5L1Q8NGL2 311 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR1S2Q8NGQ3 325 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 GGHQ92820 318 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 MVB12BQ9H7P6 319 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 HAO2Q9NYQ3 351 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 LTN1O94822 1766 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 SDHDO14521 159 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 AQP9O43315 295 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ABOP16442 354 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 CDK5Q00535 292 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ABLIM2Q6H8Q1 611 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 SERINC5Q86VE9 423 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 OR4D6Q8NGJ1 314 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 L3HYPDHQ96EM0 354 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 FEVQ99581 238 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 HINT2Q9BX68 163 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 GORASP2Q9H8Y8 452 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 DUSP22Q9NRW4 184 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 TAC3Q9UHF0 121 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 SMIM30A4D0T7 59 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 UPK3BL1B0FP48 263 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 UPK3BL2E5RIL1 263 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF207O43670 478 aaKnown RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF780AO75290 641 aaPredicted RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 JTBO76095 146 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ITGB2P05107 769 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ADORA3P0DMS8 318 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 OTX2P32243 289 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 HNRNPA3P51991 378 aaKnown RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ADARB1P78563 741 aaKnown RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 EEF1DP3Q658K8 133 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 KIAA0895LQ68EN5 471 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 HBMQ6B0K9 141 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 OPN5Q6U736 354 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 OR4N5Q8IXE1 308 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 TECTBQ96PL2 329 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 PURGQ9UJV8 347 aaKnown RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 PCDHA9Q9Y5H5 950 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 A6NLC8 198 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 TRAF3IP2O43734 574 aaPredicted RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 HLA-DMAP28067 261 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 GDF10P55107 478 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ACSM1Q08AH1 577 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 P2RY14Q15391 338 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 NCBP2-AS2Q69YL0 99 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 C17orf99Q6UX52 265 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF620Q6ZNG0 422 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 TRAPPC6BQ86SZ2 158 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 FAM185AQ8N0U4 392 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ECHDC3Q96DC8 303 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 GSX2Q9BZM3 304 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 LIN7BQ9HAP6 207 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ACKR4Q9NPB9 350 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 SLC35D1Q9NTN3 355 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 SLIT3O75094 1523 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 KLRG2A4D1S0 409 aaPredicted RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ANKRD34BA5PLL1 514 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 CEBPZOSA8MTT3 80 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 CLIC3O95833 236 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms