RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ZNF578Q96N58 590 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-219ENST00000620786 TMEM9BQ9NQ34 198 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 POLE4Q9NR33 117 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 SMOXQ9NWM0 555 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 TAS2R8Q9NYW2 309 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 COQ3Q9NZJ6 369 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 PKD1L3Q7Z443 1732 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 OR5K3A6NET4 321 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 DNAJB5O75953 348 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 ALDOBP05062 364 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 SEC61A1P61619 476 aaKnown RBP10.61□□□□□ -0.71
CLIP1-219ENST00000620786 SNTB2Q13425 540 aaKnown RBP10.61□□□□□ -0.71
CLIP1-219ENST00000620786 LTB4RQ15722 352 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 ESCO2Q56NI9 601 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 PODNL1Q6PEZ8 512 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 CLEC14AQ86T13 490 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 WFDC5Q8TCV5 224 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 ACOT11Q8WXI4 607 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-219ENST00000620786 KIR3DX1Q9H7L2 352 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 MED16Q9Y2X0 877 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 A0A0G2JMP0 313 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 LSM1O15116 133 aaKnown RBP10.61□□□□□ -0.71
CLIP1-219ENST00000620786 CD40LGP29965 261 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 WNT4P56705 351 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 C17orf67Q0P5P2 114 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 P2RY14Q15391 338 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 SLC36A2Q495M3 483 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 FAM111BQ6SJ93 734 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 OR4M2Q8NGB6 313 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 OR4K15Q8NH41 348 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 VAPAQ9P0L0 249 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 AK6Q9Y3D8 172 aaKnown RBP10.61□□□□□ -0.71
CLIP1-219ENST00000620786 ANKRD34BA5PLL1 514 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 B4DXG7 233 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 M0R233 179 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 EFNA3P52797 238 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 FOXC1Q12948 553 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 PCGF3Q3KNV8 242 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 BCL7AQ4VC05 210 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 C9orf50Q5SZB4 431 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 C18orf63Q68DL7 685 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 TMEM64Q6YI46 380 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF681Q96N22 645 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 EDEM2Q9BV94 578 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 INTS6Q9UL03 887 aaKnown RBP10.61□□□□□ -0.71
CLIP1-219ENST00000620786 TOGARAM1Q9Y4F4 1720 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 SERINC4A6NH21 518 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 ARSBP15848 533 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 MED25Q71SY5 747 aa10.61□□□□□ -0.71
CLIP1-219ENST00000620786 ENDOVQ8N8Q3 282 aaKnown RBP10.61□□□□□ -0.71
CLIP1-219ENST00000620786 TRUB1Q8WWH5 349 aaKnown RBP10.61□□□□□ -0.71
CLIP1-219ENST00000620786 DDX31Q9H8H2 851 aaKnown RBP10.61□□□□□ -0.71
CLIP1-219ENST00000620786 DCAF13Q9NV06 445 aaKnown RBP10.61□□□□□ -0.71
CLIP1-219ENST00000620786 TMEM269A0A1B0GVZ9 245 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 H0Y8X5 98 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 PRKRAO75569 313 aaKnown RBP10.6□□□□□ -0.71
CLIP1-219ENST00000620786 SERPINE2P07093 398 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 KCNAB1Q14722 419 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 LTC4SQ16873 150 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF181Q2M3W8 571 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 BPHLQ86WA6 291 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-219ENST00000620786 LGALS12Q96DT0 336 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 ATOH8Q96SQ7 321 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 EIF5A2Q9GZV4 153 aaKnown RBP10.6□□□□□ -0.71
CLIP1-219ENST00000620786 TP63Q9H3D4 680 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-219ENST00000620786 AGPAT4Q9NRZ5 378 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 TP53TG5Q9Y2B4 290 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 FAM166BA8MTA8 275 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 PPP6CO00743 305 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 DNAJB6O75190 326 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 PKLRP30613 574 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 MAGEA6P43360 314 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF81P51508 661 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 FGL1Q08830 312 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF534Q76KX8 674 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 SLC41A2Q96JW4 573 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 SLC46A1Q96NT5 459 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 MFRPQ9BY79 579 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF587BE7ETH6 402 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 GOSR2O14653 212 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 HEXAP06865 529 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 BCL6P41182 706 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 OR8B8Q15620 311 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 TRNP1Q6NT89 227 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 OR7G1Q8NGA0 311 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 OR1E3Q8WZA6 343 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 RSPRY1Q96DX4 576 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 C4orf36Q96KX1 117 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 TMED7-TICAM2A0A0A6YYA0 188 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 D6RAR5 112 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 CREBL2O60519 120 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF780AO75290 641 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-219ENST00000620786 PRSS3P35030 304 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 ETV5P41161 510 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 RAB31Q13636 194 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 GARNL3Q5VVW2 1013 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 PRSS48Q7RTY5 328 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 VRK3Q8IV63 474 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF687Q8N1G0 1237 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF808Q8N4W9 903 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms