RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ACER3Q9NUN7 267 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 RHCGQ9UBD6 479 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 OSGIN1Q9UJX0 560 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 A0A1B0GVC2 190 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 ZC3H12DA2A288 527 aaKnown RBP12.3□□□□□ -0.44
NEK3-210ENST00000620675 hCG_2039718K7EN88 272 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 FFAR1O14842 300 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 LYPD3O95274 346 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 GP1BBP13224 206 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 SLC1A3P43003 542 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 SUCLG1P53597 346 aaKnown RBP12.3□□□□□ -0.44
NEK3-210ENST00000620675 TRAP1Q12931 704 aaKnown RBP12.3□□□□□ -0.44
NEK3-210ENST00000620675 IFI44LQ53G44 452 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 SLC25A53Q5H9E4 307 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 VASNQ6EMK4 673 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 GFRALQ6UXV0 394 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 C3P1Q6ZMU1 363 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 WDR88Q6ZMY6 472 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 UBQLNLQ8IYU4 475 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 ADAMTS16Q8TE57 1224 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 LZICQ8WZA0 190 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 MIB2Q96AX9 1013 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 ZBTB8AQ96BR9 441 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 PYURFQ96I23 114 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 TIMP4Q99727 224 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 OR11A1Q9GZK7 315 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 RPS6KA6Q9UK32 745 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 SAMD4AQ9UPU9 718 aaKnown RBP12.3□□□□□ -0.44
NEK3-210ENST00000620675 LRRK2Q5S007 2527 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 A0A087WZY1 265 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 FAAHO00519 579 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 SUSD5O60279 629 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 SFTPDP35247 375 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 SRYQ05066 204 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 ZSWIM7Q19AV6 140 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 C1QL3Q5VWW1 255 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 WBP2NLQ6ICG8 309 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 EID3Q8N140 333 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 GHDCQ8N2G8 530 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 ST8SIA1Q92185 356 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 ABTB1Q969K4 478 aaPredicted RBP12.3□□□□□ -0.44
NEK3-210ENST00000620675 SLC35B4Q969S0 331 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 PIGQQ9BRB3 760 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 PNPLA3Q9NST1 481 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 TESQ9UGI8 421 aaKnown RBP12.3□□□□□ -0.44
NEK3-210ENST00000620675 A4GNTQ9UNA3 340 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 SLC9A8Q9Y2E8 581 aa12.3□□□□□ -0.44
NEK3-210ENST00000620675 ADGRG4Q8IZF6 3080 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 A0A0B4J2E0 115 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 A0A1B0GX12 115 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 TMEM72A0PK05 275 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 C7orf72A4D263 438 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 EIF4E1BA6NMX2 242 aaKnown RBP12.29□□□□□ -0.44
NEK3-210ENST00000620675 AQP7O14520 342 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 SEC14L5O43304 696 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 HCN1O60741 890 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 EDN3P14138 238 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 CDH12P55289 794 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 DLX5P56178 289 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 CLDN18P56856 261 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 LSM11P83369 360 aaKnown RBP eCLIP12.29□□□□□ -0.446e-7■□□□□ 10.5
NEK3-210ENST00000620675 CCNIQ14094 377 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 KRTCAP3Q53RY4 240 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 ARHGAP11AQ6P4F7 1023 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 GRINAQ7Z429 371 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 ATG4DQ86TL0 474 aaPredicted RBP12.29□□□□□ -0.44
NEK3-210ENST00000620675 GGNQ86UU5 652 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 ADGRG5Q8IZF4 528 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 LSMEM1Q8N8F7 131 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 GEMIN6Q8WXD5 167 aaKnown RBP12.29□□□□□ -0.44
NEK3-210ENST00000620675 MRGPRX4Q96LA9 322 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 ZNF559Q9BR84 538 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 MUC13Q9H3R2 512 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 NDUFAF4Q9P032 175 aa12.29□□□□□ -0.44
NEK3-210ENST00000620675 TMED7-TICAM2A0A0A6YYA0 188 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 FAM47E-STBD1D6RA91 191 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 PRSS23O95084 383 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 ZNF17P17021 662 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 COPZ1P61923 177 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 GLYR1Q49A26 553 aaPredicted RBP12.28□□□□□ -0.44
NEK3-210ENST00000620675 NHSL2Q5HYW2 709 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 RANBP3LQ86VV4 465 aaPredicted RBP12.28□□□□□ -0.44
NEK3-210ENST00000620675 SPATA24Q86W54 205 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 LILRA2Q8N149 483 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 RPRMLQ8N4K4 120 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 RNF217Q8TC41 542 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 CANT1Q8WVQ1 401 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 SLC47A1Q96FL8 570 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 WDYHV1Q96HA8 205 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 ARL5BQ96KC2 179 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 MMADHCQ9H3L0 296 aaPredicted RBP12.28□□□□□ -0.44
NEK3-210ENST00000620675 SH3BGRL2Q9UJC5 107 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 TINAGQ9UJW2 476 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 TMED7Q9Y3B3 224 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 IGKV1D-42A0A075B6H8 117 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 A0A0J9YW62 118 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 A0A1W2PNR3 127 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 IFNW1P05000 195 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 KLK2P20151 261 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 POU3F2P20265 443 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms