RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 SFRP5Q5T4F7 317 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 FRRS1Q6ZNA5 592 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 EIF3MQ7L2H7 374 aaKnown RBP19.55■□□□□ 0.72
SRRT-218ENST00000620394 ATP6V1C2Q8NEY4 427 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 VPS37AQ8NEZ2 397 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 TMEM234Q8WY98 164 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 ARL8AQ96BM9 186 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 CCDC115Q96NT0 180 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 SLC35A3Q9Y2D2 325 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 WDR45Q9Y484 360 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 ZNF500O60304 480 aaPredicted RBP19.54■□□□□ 0.72
SRRT-218ENST00000620394 CYTIPO60759 359 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 PLAUP00749 431 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 ALDOCP09972 364 aaKnown RBP19.54■□□□□ 0.72
SRRT-218ENST00000620394 UBTFL6P0CB48 400 aaPredicted RBP19.54■□□□□ 0.72
SRRT-218ENST00000620394 OR12D1P0DN82 309 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 PGCP20142 388 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 KHKP50053 298 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 PLAURQ03405 335 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 BST1Q10588 318 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 STX3Q13277 289 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 P2RY6Q15077 328 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 CEP85LQ5SZL2 805 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 ATAD3BQ5T9A4 648 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 TNFAIP8L2Q6P589 184 aaPredicted RBP19.54■□□□□ 0.72
SRRT-218ENST00000620394 SEZ6L2Q6UXD5 910 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 SLC25A43Q8WUT9 341 aaPredicted RBP19.54■□□□□ 0.72
SRRT-218ENST00000620394 ROPN1LQ96C74 230 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 QRSL1Q9H0R6 528 aaKnown RBP19.54■□□□□ 0.72
SRRT-218ENST00000620394 ACER3Q9NUN7 267 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 BTNL2Q9UIR0 455 aa19.54■□□□□ 0.72
SRRT-218ENST00000620394 CADP27708 2225 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 ABCA1O95477 2261 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 IGHV3-15A0A0B4J1V0 119 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 ZNF814B7Z6K7 855 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 BCAS1O75363 584 aaPredicted RBP19.53■□□□□ 0.72
SRRT-218ENST00000620394 OR3A2P47893 321 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 CASP9P55211 416 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 FAM174BQ3ZCQ3 159 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 SYT14P1Q58G82 188 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 ABLIM2Q6H8Q1 611 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 ADAM5Q6NVV9 412 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 CROCCP2Q86T23 111 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 ZNF619Q8N2I2 560 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 MAPK1IP1LQ8NDC0 245 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 XAGE5Q8WWM1 108 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 RAB8BQ92930 207 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 OR5B2Q96R09 309 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 USB1Q9BQ65 265 aaKnown RBP19.53■□□□□ 0.72
SRRT-218ENST00000620394 POTEKPQ9BYX7 375 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 EXOSC3Q9NQT5 275 aaKnown RBP19.53■□□□□ 0.72
SRRT-218ENST00000620394 AIG1Q9NVV5 245 aa19.53■□□□□ 0.72
SRRT-218ENST00000620394 PRAMEF27A3QJZ7 478 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 ZNF724A8MTY0 619 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 SDHDO14521 159 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 CD5LO43866 347 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 CYP7B1O75881 506 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 CPSF4O95639 269 aaKnown RBP19.52■□□□□ 0.72
SRRT-218ENST00000620394 IL32P24001 234 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 DIO1P49895 249 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 MERTKQ12866 999 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 TAB1Q15750 504 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 Q6ZT83 130 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 HIPK1Q86Z02 1210 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 KISS1RQ969F8 398 aaPredicted RBP19.52■□□□□ 0.72
SRRT-218ENST00000620394 TRMT61AQ96FX7 289 aaKnown RBP19.52■□□□□ 0.72
SRRT-218ENST00000620394 TEX37Q96LM6 180 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 SLC35A5Q9BS91 424 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 CCDC106Q9BWC9 280 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 REG4Q9BYZ8 158 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 SERINC1Q9NRX5 453 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 PNPOQ9NVS9 261 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 MARCOQ9UEW3 520 aaPredicted RBP19.52■□□□□ 0.72
SRRT-218ENST00000620394 LAMP3Q9UQV4 416 aa19.52■□□□□ 0.72
SRRT-218ENST00000620394 CUBNO60494 3623 aa19.52■□□□□ 0.71
SRRT-218ENST00000620394 HMGN4O00479 90 aa19.51■□□□□ 0.71
SRRT-218ENST00000620394 C8BP07358 591 aa19.51■□□□□ 0.71
SRRT-218ENST00000620394 S100A3P33764 101 aa19.51■□□□□ 0.71
SRRT-218ENST00000620394 TXNL4AP83876 142 aaKnown RBP19.51■□□□□ 0.71
SRRT-218ENST00000620394 RASGEF1BQ0VAM2 473 aa19.51■□□□□ 0.71
SRRT-218ENST00000620394 ITGADQ13349 1161 aa19.51■□□□□ 0.71
SRRT-218ENST00000620394 TSC22D1Q15714 1073 aa19.51■□□□□ 0.71
SRRT-218ENST00000620394 TMPPEQ6ZT21 453 aa19.51■□□□□ 0.71
SRRT-218ENST00000620394 HSD17B8Q92506 261 aa19.51■□□□□ 0.71
SRRT-218ENST00000620394 AKAP1Q92667 903 aaKnown RBP eCLIP19.51■□□□□ 0.71
SRRT-218ENST00000620394 ZNF75CPQ92670 426 aaPredicted RBP19.51■□□□□ 0.71
SRRT-218ENST00000620394 ZNF300Q96RE9 604 aaPredicted RBP19.51■□□□□ 0.71
SRRT-218ENST00000620394 CENPHQ9H3R5 247 aa19.51■□□□□ 0.71
SRRT-218ENST00000620394 ANK3Q12955 4377 aaKnown RBP19.51■□□□□ 0.71
SRRT-218ENST00000620394 IGKV3D-15A0A087WSY6 115 aa19.5■□□□□ 0.71
SRRT-218ENST00000620394 ADAP00813 363 aa19.5■□□□□ 0.71
SRRT-218ENST00000620394 FESP07332 822 aa19.5■□□□□ 0.71
SRRT-218ENST00000620394 COX5AP20674 150 aa19.5■□□□□ 0.71
SRRT-218ENST00000620394 IDUAP35475 653 aa19.5■□□□□ 0.71
SRRT-218ENST00000620394 CHI3L1P36222 383 aaPredicted RBP19.5■□□□□ 0.71
SRRT-218ENST00000620394 APOBEC1P41238 236 aaKnown RBP19.5■□□□□ 0.71
SRRT-218ENST00000620394 CSNK2A1P68400 391 aaPredicted RBP19.5■□□□□ 0.71
SRRT-218ENST00000620394 PDK3Q15120 406 aa19.5■□□□□ 0.71
SRRT-218ENST00000620394 NCMAPQ5T1S8 102 aa19.5■□□□□ 0.71
SRRT-218ENST00000620394 GRINAQ7Z429 371 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms